KEGG   Paraburkholderia caribensis: K788_0003293
Entry
K788_0003293      CDS       T04141                                 
Name
(GenBank) DNA-directed RNA polymerase omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
bcai  Paraburkholderia caribensis
Pathway
bcai03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bcai00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    K788_0003293
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bcai03021]
    K788_0003293
   03400 DNA repair and recombination proteins [BR:bcai03400]
    K788_0003293
Enzymes [BR:bcai01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     K788_0003293
Transcription machinery [BR:bcai03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     K788_0003293
DNA repair and recombination proteins [BR:bcai03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      K788_0003293
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: ALL66121
UniProt: A0A0P0RCC7
Position
1:complement(3532264..3532467)
AA seq 67 aa
MARITVEDCLKQIPNRFELALAATYRARQLAQGHTPKIESRDKPTVVALREIAAGQVGVE
MLKKVPV
NT seq 204 nt   +upstreamnt  +downstreamnt
atggcccgcattaccgtcgaagactgtctgaaacagatcccgaatcgcttcgaactggcg
cttgccgcgacctatcgcgcacgtcagctcgctcaaggccacacgccgaaaatcgaaagc
cgcgacaagcccacggtggtcgcgttgcgtgagatcgcggccggccaggttggcgtcgaa
atgctgaagaaggtgcccgtctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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