KEGG   Paraburkholderia caribensis: K788_0003513
Entry
K788_0003513      CDS       T04141                                 
Name
(GenBank) DNA topoisomerase III
  KO
K03169  DNA topoisomerase III [EC:5.6.2.1]
Organism
bcai  Paraburkholderia caribensis
Brite
KEGG Orthology (KO) [BR:bcai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bcai03032]
    K788_0003513
Enzymes [BR:bcai01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     K788_0003513
DNA replication proteins [BR:bcai03032]
 Prokaryotic type
  DNA Topoisomerases
   K788_0003513
SSDB
Motif
Pfam: Topoisom_bac Toprim_Crpt Toprim HypA HC2 OrfB_Zn_ribbon PADR1_Zn_ribbon DnaJ_CXXCXGXG zf_Rg
Other DBs
NCBI-ProteinID: ALL63462
UniProt: A0A0P0R5T5
Position
1:745340..747997
AA seq 885 aa
MSKALIIAEKPSVANDIARALGGFTKHDEYFESDDFVLSSAVGHLVEIAAPEEYEVKRGK
WSFANLPVIPPHFDLHPIAKSESRLKVLNRLIKRKDVDRLINACDAGREGELIFRLIAQH
AKAKQPVQRLWLQSMTPAAIRDGFAQLRSDNDMQPLADAARCRSEADWLVGINGTRAMTA
FNSKGGGFFLTTVGRVQTPTLSIVVEREEKIRRFVPRDYWEVKAEFVCAAGFYEGRWYDP
KFKKDEFDPEKRDSRLWSLPAAETIVAACRGQTGIVTEESKPSTQLSPALFDLTSLQREA
NGRFGFSAKNTLGLAQALYEKHKVLTYPRTDARALPEDYLETVAHTLEMLKESNNYLPYA
KQVLDKGWVKPNKRIFDNSKISDHFAIIPTLQAPKALSEPEQKLYDLVVKRFLAVFFPAA
EFRVTTRITEVVGHHFKTEGKVLVEPGWLQIYGRETAGEDANLVPVQKGEKVKTDKIAAQ
QLVTKPPARYNEATLLSAMEGAGKLVEDDELREAMAAKGLGTPATRAAIIEGLLGEKYLV
REGRELIPTAKAFQLMTLLRGLDVKELTAPELTGEWEYKLSQMERGKLPRDAFMQEIARM
TQTIVKRAKEYDSDTIPGDYATLQTPCPNCGGQVKENYRRFACTKCEFSISKIPGGRQFE
IEEVEELMQKKQIGPLSGFRSKMGRPFSAILKLSFDDETKNYKLEFDFGQDQGGEDGEAP
DFSEQTPVGACPKCGGKVFEHGMSYVCENSVANPKTCDFRSGKVILQQEIAREQMAKLLE
DGRTDLLTNFKSSRTGRNFKAFLVKQSDGKIGFEFEKKEPKEGAAKKTAAKSAAKAAPES
GNDEAANEAPARKVAAKTAAAKKAPARKAAAKTTAAKTAARKTGS
NT seq 2658 nt   +upstreamnt  +downstreamnt
atgtccaaagcactgatcatcgccgaaaagccatccgtcgcgaacgacatcgcgcgagct
ttgggcggttttaccaagcatgacgagtacttcgaaagcgacgacttcgtcctttcgtcg
gcggtcggccatctcgtcgagatcgctgcgccggaagaatatgaagtcaaacggggcaaa
tggagtttcgccaatctccccgttattccgccgcatttcgatctgcatccaatcgcgaaa
agcgagtcgcggctgaaagtcctgaaccggctgatcaagcgcaaagacgtcgatcgcctg
atcaacgcatgtgacgcggggcgcgagggcgagcttatttttcgcctgatcgcgcaacac
gcaaaagcgaagcagccggtacagcgcctgtggctgcagtcgatgacgcccgccgcgatc
cgcgacggcttcgcgcaactgcgcagcgacaacgacatgcagccgctcgcggatgccgca
cgctgccgctcggaagctgactggctggtcggcatcaacggcacgcgtgcgatgaccgcg
ttcaacagcaagggcggcggcttcttcctgaccaccgtcggccgcgtccagacgccgacg
ctgtcgatcgtcgtcgagcgcgaagagaagattcgccgcttcgtgccgcgcgactattgg
gaagtgaaggcggaattcgtctgcgcggcgggcttctacgaaggccgctggtacgacccg
aagttcaagaaggacgagttcgatccggaaaagcgcgattcgcgcctctggagcctgccg
gctgccgaaacgatcgtcgccgcctgtcgcggccagacgggcatcgtgacggaagaatcg
aagccgtcgacgcaactgtcgcccgcgctcttcgacctcaccagtctgcagcgcgaagcc
aacggacgtttcggcttttcggccaagaacacgctcgggctcgcccaggcgctgtacgaa
aagcacaaggtgctgacctatccccgtaccgacgcgcgcgcgctgccggaagactacctg
gagacggtcgcgcacacgctggagatgctcaaggagagcaacaactatctgccgtacgct
aagcaggtgctcgacaagggctgggtgaagcccaacaagcgcatcttcgacaattcgaag
atcagtgatcacttcgctatcatcccgacgctgcaggcgccgaaggcgctctccgagccc
gagcagaagctgtacgacctcgtcgtcaagcgcttcctcgccgtgttcttcccggctgcc
gagttccgcgtgacgacgcgtattacagaagtcgtcggtcatcatttcaagaccgaaggc
aaggtgctcgtcgagccgggctggctgcagatctatggccgcgagacggccggcgaggac
gcgaatctcgtcccggttcagaagggcgagaaggtcaaaaccgacaagatcgccgcgcag
caactcgtgacgaaaccgcccgcacgctacaacgaagcaacgctgctgtcggcgatggaa
ggcgcgggcaaactcgtcgaagacgacgaactgcgcgaggcaatggcggcaaagggtctc
ggcacgccggctacgcgcgcggccatcatcgaaggtctgctcggcgaaaagtatctggtc
cgtgaaggccgcgaactgatcccgaccgcgaaggctttccagctgatgacgctgctgcgc
ggcctcgacgtgaaggaactgaccgcgccggaactgacgggcgaatgggaatacaagctg
tcgcagatggaacgcggcaagctgccgcgcgacgcgttcatgcaggaaatcgcccgcatg
acgcagaccatcgtgaagcgcgcgaaggagtacgactccgacacgattcccggcgactac
gcgacgctgcaaacgccttgccccaattgcggcggccaggtgaaggaaaactaccggcgc
ttcgcctgcacgaagtgcgagttctcgatctcgaagattccgggcggccggcagttcgag
atcgaggaagtcgaagagctcatgcagaagaagcaaatcggtccgctttccggtttccgc
agcaagatgggtcggccgttttcggcgatcctcaagctctcgttcgatgacgaaacgaag
aactacaagctcgagttcgacttcggccaggatcagggcggcgaagatggcgaggcgccg
gacttctccgagcaaacgcccgtcggcgcgtgtccgaagtgcggcggcaaggtgttcgag
cacggcatgagctatgtctgcgagaactcggttgcgaatccgaagacctgcgacttccgt
tcgggcaaggtgatcctgcagcaggaaatcgcgcgcgagcagatggcgaaactgctggag
gatggccgaaccgacctgctgacgaacttcaagtcgtcgcgcacgggccgcaacttcaag
gcattcctcgtcaagcagagcgacggcaagatcggcttcgagttcgaaaagaaggaaccg
aaggaaggcgcagcgaagaagacggccgcgaagtccgcagccaaggcggcgcccgagtcc
gggaacgacgaggcggcgaacgaggcaccggccagaaaggtcgcggcgaagacggctgca
gccaagaaagcgccagccaggaaggccgccgccaagacgacggcggcgaaaaccgcagcg
cgcaagacgggttcgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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