KEGG   Paraburkholderia caribensis: K788_0003539
Entry
K788_0003539      CDS       T04141                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
bcai  Paraburkholderia caribensis
Brite
KEGG Orthology (KO) [BR:bcai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bcai03032]
    K788_0003539
   03400 DNA repair and recombination proteins [BR:bcai03400]
    K788_0003539
Enzymes [BR:bcai01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     K788_0003539
DNA replication proteins [BR:bcai03032]
 Prokaryotic type
  DNA Topoisomerases
   K788_0003539
DNA repair and recombination proteins [BR:bcai03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      K788_0003539
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3
Other DBs
NCBI-ProteinID: ALL63487
UniProt: A0A0P0R6C5
Position
1:complement(771109..773580)
AA seq 823 aa
MTDTNNSQPDNSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEAL
AGHCDDIQVIIHADNSISVTDNGRGIPTGVKRDDKHDPKRSAAEIVMTELHAGGKFDQNS
YKVSGGLHGVGVSCVNALSSWLRLTVRRDGKKHFMEFHRGVPQNRVIEEVDGERLSPIPV
VGDTENRGTEVHFMADETIFGNVEYHYDILAKRIRELSFLNNGVRIRLTDQRSGKEDDFA
FVGGVKGFVEYINKTKTVLHPTIFHIVGEKDGVGVEVAMQWNDSYNESVLCFTNNIPQRD
GGSHLTGLRAAMTRVINKYIVDHEIAKKAKVETSGDDMREGLSCVLSVKVPEPKFSSQTK
DKLVSSEVRAPVEDVVAKALEEFLLETPNDAKIICGKIVDAARARDAARKAREMTRRKGV
LDGVGLPGKLADCQEKDPAKSEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKAR
YDKLLSSEQIVTLITALGCGIGKEDYNLEKLRYHRIIIMTDADVDGAHIRTLLLTFFYRQ
MPEMIERGYIYIAQPPLYKVKAGKDERYLKDTAELNAHMLRLALNGSELVPSEGTTPIAG
DALGELARSYLLAQGVVDRLSRLYDEAALGAVMDGVTIDLSSEQSTQASAVALQDKLRDD
PLKPEVNVIPMYDPVRELRSLRVERRHHGNVKVSVIDEEFQLTADYQQLVNTANTFKGLI
GEGAVIKRGERSMAVGDFKSAMKWLIADAERNVSKQRYKGLGEMNPEQLWETTMDPNVRR
LLRVQIEDAIAADGIFTTLMGDEVEPRRAFIESNALRAGNIDV
NT seq 2472 nt   +upstreamnt  +downstreamnt
atgactgatacgaacaattcgcaacccgataacagctacggcgcctcgtccattcagatc
ctcgaaggtctggaggccgtgcgcaagcggccgggtatgtacatcggcgatacgtcggac
gggaccggtctgcatcacctcgtgttcgaggtgctcgacaattcgatcgacgaggcgctc
gccggtcattgcgacgacattcaggtcatcatccacgccgacaactcgatttccgtgacc
gacaacggccgcggcattcccacaggcgtcaagcgcgacgataaacacgatccgaagcgc
agcgccgctgaaatcgtcatgaccgaactgcacgcgggcggcaagttcgaccagaacagc
tacaaggtgtcgggcggtctgcacggcgtgggcgtgtcgtgcgtgaacgcgctgtcgtcg
tggctgcgcctcaccgtgcgccgggacggcaagaagcacttcatggagttccaccgtggc
gtgccgcagaaccgcgtgatcgaagaagtggacggcgaacgcctgtcgccgatccccgta
gtcggcgatacggaaaaccgtggcactgaagtgcacttcatggccgatgagacgatcttc
ggcaacgttgaataccactacgacattcttgcgaagcgtattcgcgaactctcgttcctg
aacaacggcgtgcggattcgtctcaccgatcagcgttcgggcaaggaagacgatttcgca
ttcgtgggcggcgtgaagggcttcgtcgagtacatcaacaagacgaagactgtgctgcat
ccgaccattttccatatcgtcggcgagaaggacggtgtgggcgtcgaagtggcgatgcag
tggaacgacagctacaacgaaagcgtgctgtgcttcacgaacaacattccgcagcgcgac
ggcggtagccatttgacgggtctgcgcgcggccatgacgcgggtgatcaacaagtacatc
gtcgaccacgaaatcgcgaagaaggcgaaggtcgaaacctcgggcgacgacatgcgtgaa
gggctgtcgtgtgtgctgtcggtgaaggtgcccgagccgaagttcagttcgcagacgaag
gacaagctggtttcgtcggaagtgcgcgcgcccgtggaagacgtggtcgcgaaggcgctc
gaagaattcctgctggaaacgccgaacgacgcgaagatcatttgcggcaagatcgtcgat
gccgcgcgtgcccgcgacgcggcacgcaaggcgcgtgaaatgacgcgacgcaagggcgtg
ctggacggcgttgggcttcccggcaagctggcggactgccaggagaaagatcctgccaag
tctgagatttacatcgtcgagggtgattcggcaggcggctcagcaaagcagggccgcgac
agaaaattccaggccattctgccgctgcgcggtaaggtgctgaacgtcgagaaggcgcgt
tacgacaagctgctgtcctcggagcagatcgtcacgctgattacagcgttgggctgcggc
atcggcaaggaagactacaacctcgagaagctgcgttaccaccgcatcatcatcatgacc
gacgcggacgtcgacggcgcgcacatccgtacgctgctgctgacgttcttctatcgtcag
atgccggagatgatcgagcgcggctatatctatatcgcgcagccgccgctgtacaaggtg
aaggcgggcaaggacgagcgttatctgaaggacacggcggagttgaacgcgcatatgctg
cgtctggctcttaacgggtctgaactggttccgtcagaaggcacgacgccgatcgcgggc
gatgcgctgggcgagctggctcgttcctatctgctggcgcaaggagtcgtggatcgtctg
agcaggttgtacgacgaagcggcccttggcgcggtgatggacggtgtgacgatcgatctg
tcgagcgagcagtcgacgcaggcatcggccgtcgcgctccaggacaagctgcgcgacgat
ccgctcaagcccgaggtcaacgtgatcccgatgtacgatcccgtgcgcgaactgcgttcg
ctgcgcgtcgagcgtcgtcatcacggcaatgtgaaggtcagtgtcatcgacgaagagttc
cagctcacggcggattatcagcaactcgtgaacacggcgaatacgttcaaggggttgatc
ggcgagggcgctgtgatcaagcgtggcgagcggagcatggctgtcggcgacttcaagagc
gcgatgaaatggctgatcgccgacgccgagcggaacgtttcgaagcagcgctataaggga
cttggtgagatgaatcccgaacagctctgggaaacgacgatggacccgaacgtgcgtcgc
ttgctgcgcgtgcagatcgaagatgcgattgcagcggatgggatctttacgacgctgatg
ggtgatgaagtcgagccgcgtcgcgcgtttatcgagagcaatgcgttgcgggcggggaat
atcgacgtttga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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