KEGG   Bacteroides cellulosilyticus: BcellWH2_03211
Entry
BcellWH2_03211    CDS       T04116                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
bcel  Bacteroides cellulosilyticus
Brite
KEGG Orthology (KO) [BR:bcel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bcel03032]
    BcellWH2_03211 (topA)
   03400 DNA repair and recombination proteins [BR:bcel03400]
    BcellWH2_03211 (topA)
Enzymes [BR:bcel01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     BcellWH2_03211 (topA)
DNA replication proteins [BR:bcel03032]
 Prokaryotic type
  DNA Topoisomerases
   BcellWH2_03211 (topA)
DNA repair and recombination proteins [BR:bcel03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BcellWH2_03211 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim
Other DBs
NCBI-ProteinID: ALJ60447
UniProt: A0A0P0GQP8
Position
complement(4145040..4147397)
AA seq 785 aa
MPKNLVIVESPAKAKTIEKFLGKDFKVLSSYGHIRDLKKKEFSIDVEKNFEPDYEIPEDK
KALVKTLKAEAKDADTVWLASDEDREGEAIAWHLYEVLKLEPEHTKRIVFHEITKTAILK
AIEQPRNIDINLVNAQQARRILDRIVGFELSPVLWKKVKPALSAGRVQSVAVRLIVERER
EIHAFQSEASYKVTAVFLVPDTDGKLVEMKAELAHRLKTKAEAQKLLESCQSAIFTIEDI
TTRPVKKSPAAPFTTSTLQQEAARKLGFTVAQTMMVAQRLYESGRITYMRTDSVNLSELA
INGSKEAIANMMGDKYVHPRHFSTKTKGAQEAHEAIRPTYMENAQIEGSAQEKKLYDLIW
KRTIASQMADAELEKTTATISISNTSEAFSATGEVVKFDGFLRVYRESYDDDVEQEDETH
LLPPLKKGQKLEYQNITATERFTQHPPRYTEASLVRKLEELGIGRPSTYAPTISTVQQRE
YVEKGDKTGEERSYNVITLKKDKITDATRTEITGAEKAKLLPTDTGTVVTDFLTQYFPSI
MDYNFTASVEKQFDEIAEGDTKWTTIMKTFYKTFHPSVESTLAAKNAHKTGERILGDDPV
SGKPVSVKIGRFGPVVQIGSAEDEEKPRFSPLKKGQSIETITLEEAMELFKLPRTLGEHE
GKTVTVNAGRFGPYIYYSGTYTSLPKGVDPMEIELEEALELIKEKAEAEAKKHLKKFDEE
PELEIMNGRYGPYIAYKGSNYKIPKDIVPEDLNLDACMEIIKLQSEKAASAPAKPKRGKY
TKKKA
NT seq 2358 nt   +upstreamnt  +downstreamnt
atgccaaaaaaccttgtcattgtcgagtcaccggcaaaagcaaaaacaattgaaaagttc
ctgggaaaagattttaaagttctttccagctatggtcatatacgcgacttgaagaagaaa
gaattcagcattgacgttgaaaaaaactttgaaccggactatgaaattccggaagataag
aaagcactggttaagacactgaaagctgaagctaaagatgctgataccgtatggttggct
tccgatgaggaccgcgagggagaagccatcgcctggcacttgtatgaagtactaaaactg
gaaccggaacataccaaacgtatcgtattccatgaaatcaccaaaaccgctatactgaaa
gctatcgagcaaccacgcaatattgatatcaatcttgtcaatgcccagcaggcacgccgc
attcttgaccgtattgtaggttttgaactttctcccgtattatggaaaaaagtgaaaccc
gcactctctgccggacgtgtacaatctgtagccgtacggctcattgtagagcgtgaacgt
gaaatacatgctttccaaagtgaagcatcttataaagtcactgctgttttccttgttccc
gacactgacggaaaactcgttgagatgaaggcggaacttgcacaccgccttaagaccaaa
gctgaggcgcagaagctcctggaaagctgccaatcagcaatatttaccattgaagatatt
acgacacgtccggtaaagaagagcccggctgcaccgttcacgacttctactttgcaacag
gaagccgcacgcaaacttggcttcactgtagcacaaacgatgatggtagctcaacggttg
tatgaatcaggacgtattacttatatgcgtaccgactccgtaaacttatcggaactcgcc
atcaacggcagcaaagaagccattgccaatatgatgggagacaaatatgtacatccacgc
cacttcagcaccaagaccaaaggagcacaagaagcgcatgaggctatccgtcccacatat
atggagaatgcacagatagaaggtagtgcacaagaaaagaaactatacgatctgatctgg
aaacgtaccattgcttctcaaatggcagatgccgaactggaaaagacaacagcgaccatc
agtataagcaatacatccgaggctttcagtgccacgggagaagttgtgaaattcgacggt
ttcctgcgtgtatacagagaatcttatgatgacgatgtggaacaggaagatgaaactcat
ctgctgccaccgttaaagaaaggtcagaagttagagtatcagaacattactgccactgaa
cgctttacacaacatccaccccgctatacagaagcaagcttggtgcgcaaactggaggaa
ttagggataggtcgcccctctacttatgcgcctacgatctctaccgttcaacaacgtgag
tacgtagaaaaaggagataaaacaggtgaggaacgttcatacaatgtaattactctgaag
aaagacaaaatcacagatgccacccgtactgagatcaccggagcagaaaaagcaaaactg
ctacctacagatacaggtacagtagtgactgacttcctgacacagtacttccccagcatc
atggattacaacttcacagccagtgtagaaaagcaatttgatgagattgccgagggagat
acaaaatggacgactatcatgaagacgttctataaaaccttccatccatccgtggaaagt
actctcgctgccaaaaatgcacacaagaccggagaacgcatattgggagatgatcctgtt
agcggcaagcctgtaagcgtcaaaatcggacgtttcggccctgtagtacaaattggaagt
gctgaagatgaagaaaaaccccgcttctctcctttaaagaaaggtcaatccatcgaaaca
atcactttagaggaagcaatggagctgtttaagttacctcgtacccttggtgagcatgaa
ggcaaaacggttactgtcaatgccgggcgtttcgggccgtacatttattacagcggaact
tatacttcacttcccaaaggcgtagatccgatggaaatagaattagaagaggctttggaa
ttaataaaagaaaaagcggaagcagaagcaaagaagcacctcaagaagttcgacgaagaa
cctgagctggaaatcatgaacggaagatatggcccttacattgcttataaaggcagtaat
tacaaaatcccaaaggatatcgttccggaagatttaaacttggacgcctgcatggaaatc
atcaaattacagagcgagaaagctgcatcagctccagctaaaccgaaacgaggaaaatat
accaagaagaaagcataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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