KEGG   Burkholderia cenocepacia DDS 22E-1: DM39_1092
Entry
DM39_1092         CDS       T03308                                 
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
bcen  Burkholderia cenocepacia DDS 22E-1
Pathway
bcen03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bcen00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    DM39_1092 (recB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bcen03400]
    DM39_1092 (recB)
Enzymes [BR:bcen01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     DM39_1092 (recB)
DNA repair and recombination proteins [BR:bcen03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     DM39_1092 (recB)
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C PDDEXK_1 UvrD_C_2 DUF374
Other DBs
NCBI-ProteinID: AIO33023
UniProt: A0A088U718
Position
1:1175710..1179420
AA seq 1236 aa
MSAVTQPQAALELDVFACPLDGVNQIEASAGTGKTWNICALYVRLLLEKDLGADQILVVT
FTKAATAELHERIRGRLAQLAHALETGDDGGDPFIVRLLDTTLGDDGALDPETAAKRIRR
ALRAFDQAAIHTIHAFCQRALQEAPFAAAMPFAFDMEADDAALRFELAADFWRTRVEPMA
ARWPGFASWLVESGAGPAALDAQLARRLKKPLAALRWDGVTEPDDAAEAAAAECFAEAAR
LWAAERDAIDALLRTAQPVLNQRSHKPDAVADALGAWTAHFTQGDATAALPKAALKLTRT
ALAKATKKGGATPEHPFFEVADALEAAVAAAEAAQRARWLALIAEWLDSAPGELAERKRT
RRVVSFDDLLANLYHALHAHPWLAETLRARYPAALIDEFQDTDPLQFAIFDRIFAPGGPL
FLVGDPKQAIYSFRAADLHTYLRARERASACYTLAVNQRSTPAIVEACNRLFLSNPRAFV
LDGLDYYAVRAGTRVRAPFVDDTDPGPAGDFRIWTLPGGDATLLKRDAQAQAAQACAAEI
ARLMRGAREGRARLGDAPLSPGDIAVLVQTHRQGSLVKRVLAAWGIGSVELAQASVFSTG
DAEQLERVLAAIDAPGDLRRLRAALASDWFGLDAAALWRMEQGDGEAQRDADDGGSTDAM
SWVERFSRYRLLWRERGFAVMWRTFTRELRIAERLMSGADGERRVTDINHLAELTQARAS
AQPGIAPTLRWLAAQRLDGGGEEAQLRLESDRNLVQIVTVHKSKGLEYAVVFCPFLNDGG
LREPPASGLPDAREYHDDAGDAVLHYGCDDEAAAHAARQVLREQAAERARLVYVALTRAV
YRCYLVAGPYLSSRSTREARRSVLNWLVAGAGQSFDAWLDEPPDEAALDAAWRALAGGPV
SVAPLPAPARRERVAAGHDASQTLAARQATRVLRDAWRMASFSSLTASMAREEAGVAAVP
DDDLRPDHDALAALVPDGDFVVADMPAVVPPDDDILVFPRGAAAGECLHRLFELSRFTQP
ETWREAALGALHDRPVEAEPELAARLPAMMVRLVDDVVHTELVPGMRLADLDPAKRLDEM
GFLFPAPSLELGALRRLLVAHGYPDVALEAGTLAGFIKGFIDMIVEHDGRFWIVDWKSNH
LGNTPDAYGPRALDVAMADHAYHLQALLYTVALHRYLRGRLPGYDYDTHVAGYLYLFVRG
VRPGWRSGGEPAGVHARRPSRELVDALDRMMEGGRA
NT seq 3711 nt   +upstreamnt  +downstreamnt
atgagtgccgtcacgcagccgcaggcggcgctcgaactcgacgtcttcgcgtgtccgctc
gacggcgtaaaccagatcgaggcgtcggccggcacgggcaagacgtggaacatctgcgcg
ctctacgtgcgcctgctgctcgaaaaggatctcggcgcggaccagattctcgtcgtgacc
ttcacgaaggcggcgaccgccgaactgcacgaacggatccgcgggcggctcgcacagctc
gcgcatgcgctcgagaccggcgacgacggcggcgacccgttcatcgtccggctgctcgac
acgacgctcggcgacgacggcgcgctcgacccggagacggccgcgaagcggatccgccgc
gcgctgcgcgcgttcgaccaggccgcgatccatacgattcacgcgttctgccagcgcgcg
ctgcaggaagcgccgttcgcggccgcgatgccgttcgcgttcgacatggaagcggacgat
gcggcgctgcgcttcgagctggccgcggatttctggcgcacgcgcgtcgagccgatggcc
gcgcgctggcccggtttcgcgagctggctcgtcgaatcgggcgccgggcccgccgcgctc
gacgcgcagctggcacgccggctgaagaagccgctcgccgcgctgcgctgggacggcgtg
accgaacccgacgacgcggccgaagccgccgccgccgaatgctttgccgaggcggcgcgg
ctgtgggccgccgagcgcgacgcgatcgatgcactgctgcgcaccgcgcagccggtgctg
aaccagcgttcgcacaagcccgacgcggtcgccgatgcgctcggcgcgtggactgcgcat
ttcacgcagggcgacgcgacggccgcgctgccgaaggccgcgctgaagctcacgcgcacc
gcgctcgcgaaggcgaccaagaagggcggcgcgacacccgagcatccgttcttcgaagtg
gccgacgcgctcgaagcggcggtcgcggccgccgaggccgcgcagcgcgcgcgctggctc
gcgctgattgccgaatggctcgacagcgcgcccggcgagctggccgagcgcaagcgcacg
cggcgcgtggtgtcgttcgacgacctgctcgcgaacctctatcacgcgctgcacgcgcat
ccgtggctcgccgagacgctgcgcgcgcgctatccggccgcgctgatcgacgagttccag
gacaccgatccgctgcagttcgcgatcttcgaccggatcttcgcgccgggcgggccgctg
tttctcgtcggcgatccgaagcaggcgatctacagcttccgcgcggcggacctgcacacg
tacctccgggcgcgcgagcgcgcgagcgcgtgctatacgctcgcggtcaaccagcgctcg
acgccggcgatcgtcgaggcgtgcaaccgcctgttcctgtcgaatccgcgtgcgttcgtg
ctcgacggactcgactactacgcggtgcgcgcgggcacgcgcgtgcgcgcgccgttcgtc
gacgacaccgatccgggcccggccggcgacttccggatctggacgctgccgggcggcgac
gcgacgctgctcaagcgcgatgcccaggcgcaggccgcgcaggcgtgtgcggccgagatc
gcgcggctgatgcgcggcgcgcgggaagggcgcgcgcggctcggcgacgcgccgctgtcg
ccgggcgacatcgcggtgctcgtgcagacgcaccggcagggcagcctcgtcaagcgcgtg
ctcgccgcgtggggcatcggcagcgtcgagctcgcgcaggcgtcggtgttctcgaccggc
gacgccgagcagctcgagcgcgtgctcgcggcgatcgacgcgccgggcgacctgcggcgg
ctgcgcgcggcgctggcgtccgactggttcggtctcgacgcggccgcgctgtggcgcatg
gagcagggcgacggcgaagcgcaacgcgatgcggacgatggcggctcgaccgacgcgatg
agctgggtcgagcgcttttcgcgctatcgcttgctgtggcgcgaacgcggcttcgcggtg
atgtggcgcaccttcacgcgcgagctgcggatcgccgagcggctgatgtcgggtgcggac
ggcgagcgtcgcgtgaccgacatcaaccatctcgccgaactcacgcaggcgcgcgcgtcc
gcgcagcccggcatcgcgccgacgctgcgctggctcgccgcgcagcggctcgacggcggt
ggcgaggaagcgcagctgcggctcgaatccgatcgcaacctcgtgcagatcgtgacggtg
cacaagtcgaaggggctcgaatacgcggtcgtgttctgtccgttcctgaacgacggcggc
ttgcgcgagccgcccgcgtccgggttgcccgacgcgcgcgaatatcacgacgacgcgggc
gacgcggtgctgcattacggatgcgacgacgaagccgccgcgcacgcggcgcggcaggtg
ctgcgcgagcaggccgcggaacgcgcgcggctcgtctacgtcgcgctcacgcgtgcggtc
tatcgctgctatctcgtcgcggggccgtacctgtcgtcgcgttcgacgcgcgaagcgcgg
cgcagcgtgctcaactggctggtcgccggcgcagggcagtcgttcgacgcatggctcgac
gagccgcccgacgaggccgcgctcgacgccgcatggcgcgcgctcgcgggcggcccggtg
agcgtcgcgccgctgccggcgcccgcgcgccgcgagcgcgtcgcggccgggcacgatgcg
tcgcagacgctcgcggcccgccaggcgacgcgcgtgctgcgcgatgcatggcggatggcg
agcttcagttcgctgaccgcgtcgatggcgcgcgaggaagcgggcgtcgcggcggtgccg
gacgacgacctgcggcccgaccacgatgcgctggcggcgctcgtgccggacggcgacttc
gtcgtcgccgacatgccggccgtcgtgccgccggacgacgacattctcgtgtttccgcgc
ggcgcggcggcgggcgagtgcctgcaccgcctgttcgagctgagccggttcacgcagccc
gagacgtggcgcgaggccgcgctcggcgcgctgcacgaccgcccggtcgaggccgagccg
gaactcgcggcgcgtctgccggcgatgatggtgcggctggtcgacgacgtcgtgcatacc
gagctggtgccgggcatgcggctggcggatctcgacccggcgaagcgtctcgacgaaatg
ggcttcctgtttccggcgccgtcgctcgagctcggcgcgctgcgccggctgctggtcgcg
cacggctatccggacgtcgcgctggaggcgggcacgctcgccggtttcatcaagggtttc
atcgacatgatcgtcgaacacgacgggcggttctggatcgtcgactggaagtcgaaccat
ctcggcaatacgccggacgcctacggcccgcgcgcgctcgacgtcgcgatggccgatcac
gcgtaccacctgcaggcgctgctttatacggtcgcgctgcaccgctatctgcgcgggcgg
ctgcccggttacgactacgacacgcatgtcgcgggctacctgtacctgttcgtgcgcggc
gtgcggcccggctggcgcagcggcggcgagccggccggcgtgcatgcgcgccggccgtcg
cgcgaactcgtcgatgcgctcgaccggatgatggaagggggccgcgcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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