KEGG   Burkholderia cenocepacia H111: I35_4172
Entry
I35_4172          CDS       T03804                                 
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
  KO
K05591  ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
Organism
bceo  Burkholderia cenocepacia H111
Brite
KEGG Orthology (KO) [BR:bceo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bceo03009]
    I35_4172 (dbpA)
Enzymes [BR:bceo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     I35_4172 (dbpA)
Ribosome biogenesis [BR:bceo03009]
 Prokaryotic type
  rRNA helicases
   I35_4172 (dbpA)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII CMS1 AAA_22 P-loop_SecA
Other DBs
NCBI-ProteinID: CDN62008
Position
2:complement(205121..206518)
AA seq 465 aa
MTQPTATPFSALPLTPATLANLAQLGYVDMTPIQAASLPIALAGQDLIAQAKTGSGKTAA
FSLALLARLDARRFDVQAMILCPTRELADQVAQEVRRLARAEENVKVLTLCGGTPMRPQA
QSLEHGAHIVVGTPGRIMDHLDRGNLKLDALNTLVLDEADRMLDMGFFDDIAKVARMCPT
TRQTLLFSATYPDGIAKLSQQFLRNPKEIKLAERHDDSKIRQRFYEVTEDERLHAVGQLL
NHYRPVSTIAFCNTKQQCRDLLDVLHAQGFHALALHGELDQRERDQVLIQFANRSCSVLV
ATDVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRADQDGWALSLASMDEMGRVGAI
EQAQKREVEWHPLAELKPADDSVLLPPMETLQILGGRKDKIRPGDVLGALTGDAGFDGKQ
IGKINVTEFSTYVAIERGVARDALRKLNAGKIKGKRVKVRLMDEE
NT seq 1398 nt   +upstreamnt  +downstreamnt
ttgacccaaccgaccgccacgccgttcagcgcgctgccgctgacgcccgccacgctcgcg
aacctcgcgcagctcggctatgtcgacatgacgccgatccaggccgcgagcctgccgatc
gcgctggccggccaggacctgatcgcgcaggcgaagacaggcagcggcaagaccgccgcg
ttctcgctcgcgctgctcgcgcgcctcgatgcgcgccgtttcgacgtgcaggcgatgatc
ctgtgcccgacgcgcgagctggccgaccaggtcgcgcaggaagtgcgccgcctcgcgcgc
gccgaggagaacgtgaaggtgctgacgctgtgcggcggcacgccgatgcgcccgcaagcg
cagagcctcgagcacggcgcgcatatcgtcgtcggcacgccgggccgcatcatggatcac
ctcgatcgcggcaacctgaagctcgacgcgctgaatacgctggtgctcgacgaagctgac
cggatgctcgacatgggcttcttcgacgacatcgcgaaggtcgcgcggatgtgtccgacg
acgcgccagacgctgctgttctccgcgacctatccggacggcatcgcgaagctgagccag
cagttcctgcgcaatccgaaggaaatcaagctcgcggaacgccacgacgacagcaagatc
cgccagcgcttctatgaagtgaccgaggacgagcggctgcatgcggtcggccagttgctg
aaccactatcggccggtgagcacgatcgcgttctgcaacaccaagcagcagtgccgcgac
ctgctcgacgtgctgcacgcgcaaggcttccatgcgctcgcgctgcacggcgaactcgac
cagcgcgaacgcgaccaggtgctgatccagttcgcgaaccgcagctgctcggtgctggtc
gcgaccgacgtcgccgcgcgcgggctcgacatcgcgcagctcgaagcggtgatcaacgtc
gacgtgacgcccgaccccgaagtgcacgtacaccgcatcggccgcaccggccgcgcggat
caggacggctgggcgctgagcctcgcgagcatggacgagatgggccgcgtcggcgcgatc
gaacaggcgcagaagcgcgaggtcgaatggcatcccctcgccgagctgaagccggcggac
gacagcgtgctgctgccgccgatggaaacgctgcagatcctcggcgggcgcaaggacaag
atccgcccgggcgacgtgctcggcgcgctgaccggcgacgccgggttcgacggcaagcag
atcggcaagatcaacgtgaccgagttctcgacctatgtcgcgatcgagcgcggcgtcgca
cgcgacgcgctgcgcaagctcaatgcggggaagatcaagggcaagcgcgtcaaggtccgg
ttgatggacgaggagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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