KEGG   Alkalihalobacillus clausii: ABC2200
Entry
ABC2200           CDS       T00228                                 
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:3.6.4.13]
Organism
bcl  Alkalihalobacillus clausii
Pathway
bcl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bcl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ABC2200 (deaD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcl03019]
    ABC2200 (deaD)
   03009 Ribosome biogenesis [BR:bcl03009]
    ABC2200 (deaD)
Enzymes [BR:bcl01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     ABC2200 (deaD)
Messenger RNA biogenesis [BR:bcl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     ABC2200 (deaD)
Ribosome biogenesis [BR:bcl03009]
 Prokaryotic type
  rRNA helicases
   ABC2200 (deaD)
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII UTP25 AAA_30 CMS1 Helicase_RecD
Other DBs
NCBI-ProteinID: BAD64735
UniProt: Q5WFX0
Position
complement(2325666..2327279)
AA seq 537 aa
MTYFTDFDISDQVKQAIQDMGFEEPSPIQEKAIPAILTGGDVIGQAQTGTGKTAAFGIPV
VDKVTEERYIQALILTPTRELAIQVSGELQKLSAHKRIRTLPIYGGQSIGHQIKALRQGV
QVVIGTPGRMLDHLRRGTLKLNSVHTVVLDEADEMLDMGFVDDIEAILKEVNQVRQTLLF
SATMPPAIRKLSRKYMNDPKTVTINKGEVTAPSINQVYYKVLERNKIDSLCRIIDSDDVE
LGILFCRTKKGVAELTEALQARGYLVDGLHGDLTQSQRDVVMKKFRDSSIEFLIATDVAA
RGIDVENVTHVINYDIPQDPESYVHRIGRTGRAGRTGAAITLVTPREMKHLRSIEKEIKM
HIPSASVPTIEEVVEKQQSSWKNLIQDTIEQGGKEMELFLPLVDEILAEQDPKQVVAALL
KLKFSTETATEDAGYSFGDTGGAKGMVRFFINVGRNVNLTPKILGEEIGRLVGIPVKSIG
RIDIFENFSFVDVPEEAAPFVYEGLRYSRINGARVNLEPAKPRPKRERRTPAGSRRS
NT seq 1614 nt   +upstreamnt  +downstreamnt
atgacctattttacagactttgatatttcggaccaagtgaaacaagcaatccaggatatg
gggtttgaagaaccatcccctatccaagaaaaagcgattcctgccattttgacaggtggc
gatgtaattggccaagcgcaaacagggactggaaaaacagctgcttttgggataccggtt
gtcgataaagtgactgaagagcgttacattcaagcgttaattttgacgccaacaagggaa
ctggccattcaagtttctggagaactgcaaaagctatcggctcataaacggattcggacg
ttgccgatttacggcgggcaatcgatcggccaccaaatcaaagcgttgcgccaaggagtg
caagtagtgattggtaccccagggcggatgcttgaccatttgcgccgtggaacgctcaaa
cttaattcggtccataccgttgtccttgacgaagccgacgaaatgctcgatatgggcttt
gtcgatgacatcgaagcgattttaaaggaagtcaatcaagtgcgacaaacgttgttgttt
tctgctacaatgccgcctgcgatccgcaagctgtcacgaaaatacatgaacgatccgaaa
acagtgacgattaataagggcgaagtgacggcgccttcgatcaaccaagtttattataaa
gtattggagcggaataaaattgactccctttgccgcatcattgatagcgatgacgtggag
ctcggcattttgttttgccgcacgaaaaaaggtgtcgctgaactgacagaagcacttcaa
gctcggggctatctcgttgatggtctccatggagacttgacacaatctcagcgtgatgtt
gtcatgaaaaaattccgcgactcatcgatcgagttcctcattgctacagacgtagctgct
cggggcatcgatgtggaaaatgtcacccatgtcatcaactacgatattccacaagaccct
gaaagctatgtgcaccggattggccgtacagggcgagcgggccggacaggcgcagcgatt
acgttggttacgcctcgggaaatgaagcatctccgctctattgaaaaagaaatcaagatg
cacattccgtcagcgagtgtaccgacgattgaagaagtagttgaaaaacagcaaagttct
tggaaaaacttaattcaggatacaattgagcaaggcggcaaagaaatggagttgttcttg
ccccttgtcgatgaaattcttgctgagcaagaccctaaacaagtggttgcggcactattg
aaattaaagttttctacagagacggcaaccgaagatgctggctacagctttggggacaca
ggcggtgctaaaggaatggtccgcttcttcatcaatgttggacgaaatgtcaatttgacg
ccgaaaattttaggcgaagaaatcggccgccttgtcggcattcctgtcaaatcgattggc
cgcatcgacatctttgaaaacttctcctttgtggacgtaccagaagaggcggcgccattt
gtgtatgaaggcttgcgctattcccgtattaatggagcgcgcgtcaaccttgaacctgct
aagcctcgcccgaaacgggagcggcgcacgccagcagggtcgcgccgttcatag

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