KEGG T00669: Bcenmc03

Burkholderia cenocepacia MC0-3: Bcenmc03_1187

Entry

Bcenmc03_1187 CDS T00669

Definition

exodeoxyribonuclease V subunit gamma

Orthology

K03583

exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]

Organism

bcm Burkholderia cenocepacia MC0-3

Pathway

bcm03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:bcm03440]

SSDB

Motif

Pfam:

Exonuc_V_gamma

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

1:1300875..1304213

AA seq 1112 aa
MLHLFYSNRHETLADALLEDLAAFPARNGPWAPQQVIVPSAALRRRLELDIAARNGVCAN
VEFTYLAQWLWAQIGRVLTVPARSPFAPDRLVWRCYRLFAQAADGAPWLASPRLAAYLSA
SDDAMRYELAHRVAAVLDHYLTYRPEWLAAWQAGESVLAGDAAPRGISDAARDDERWQAA
LWRALLAELSDSGTPPAHRFLVEARHLDADAVARADWPESVSVFALPTMPPLHVALLREL
SRWIDVRVYALNPCREFWFDIVTAAHAEALDAAGRRDYQEVGHPLLAEWGRQTQAQLHML
HELTESAASGDASRFVENPAPTWLARVQNAILELQPEVDIGDTPVERGIEVHVCHSLARQ
LEVLHDRLLAWFDADASLQPSDVLVAVADLAAAGPLIDAVFGTAGAGGARVPYRITGLPP
SQANPVARVLLDWLALPERQVGAPELVEWLRVDAVAARYDIDAAALETVQTWLAAAGARR
GLSPRASDDAAVPAPRHTFSDALARLFLGYAMPEGAAPIGAWLPIEAATGSEAELLGRLA
RFTDDLDGFARRLAESHTPRGWSELFADTLARFFDSGAAYADALAGVRDALDAMLAAMTE
GAPDEALPAAVVRAGLAAALDDPARGGVPWGGVTFSSLTSLRGLPYRVVCLLGMDDGVLP
SLARADEFDLMAVLPKLGDRQRRDDERNLFLDLLLAARDRLLIAYTGRSIRDNAPLPPAA
LVDELLDHLAIVTAGPGAAPDAVDAARRAFIVEHPLQPFAAAYFQLGSELVSYDAERATL
ASLLAAEASRGQPREQPFFAQPLPAEPVEPVAFSEFERFWRHPARALLRGRLGIVLTDAQ
AELLDTEPFALDFAGSDALAERVLPLLIEAGEGGVHDHALRIADASPELPGGATGAVWRD
QALGSMTQLASNVRRALADGIERRPFSLLVVPKWPDTEQALFGADDAMLAADAVSAPLEL
HGTLNRLTPAGQVIYRYARPSARDYLSAWLAHLVYCAIEPGGPRRTLWFGSGGAFELTPV
AAPLERLAPLAALFRAGRRMPLRFFPRSAWARVSDGEAKAASVWINERVVSEADDPAIAI
AWRGAHPSLDEPFGTLARLVFEPLVEHLKEVA

NT seq 3339 nt +upstreamnt +downstreamnt
atgctccatctcttctattcgaaccgtcacgaaacgctggccgacgcgctgctcgaggat
ctggctgcgttcccggcccgcaacggcccgtgggcgccgcaacaggtcatcgtgccgagc
gcggcgctgcgccgccgtctcgagctcgacatcgccgcgcgcaatggcgtgtgcgcgaac
gtcgagttcacctatctcgcgcagtggctgtgggcgcagatcggccgcgtgctgacggtg
ccggcgcgctcgccgttcgcacccgaccggctcgtgtggcgctgctaccggctgttcgcg
caggcggccgatggtgcgccgtggctcgcgtcgccgcggctcgccgcgtacctgtcggcc
tccgatgatgcgatgcgctacgaactggcccatcgcgtcgcggccgtgctcgatcattac
ctgacctatcgccccgaatggctggccgcgtggcaggccggcgaatcggtgctcgcgggc
gacgccgcgccgcgcgggatcagcgacgccgcgcgcgacgacgagcgctggcaggccgcg
ctgtggcgtgcgctgctcgccgagctgagcgacagcggcacgccgccggcacaccgcttc
ctcgtcgaagcgcgccatctcgatgccgacgcggtcgcgcgcgccgactggcccgaatcg
gtcagcgtgttcgcgctgccgacgatgccgccgctgcacgtcgcgctgttgcgcgaactg
tcgcgctggatcgacgtgcgcgtctacgcgctgaacccgtgccgcgaattctggttcgac
atcgtgaccgccgcgcatgccgaggcgctcgatgcggcagggcggcgcgactatcaggaa
gtcggtcatccgctgctcgccgaatggggccggcagacgcaggcgcaactgcacatgctg
cacgaactgaccgaaagcgccgcgtcaggcgatgcgtcgcgtttcgtcgagaatcccgcg
cccacctggctcgcgcgcgtgcagaacgcgatcctcgaattgcagccggaggtcgacatc
ggcgacacgccggtcgagcgggggatcgaggtgcatgtgtgccacagcctcgctcgccag
ctcgaggtgctgcacgaccggctgcttgcctggttcgacgccgatgcgagcctgcagccg
tccgacgtgcttgtcgcggtcgccgatctcgccgcggccgggccgctgatcgacgcggtg
ttcggcacggccggcgccggcggcgcgcgggtgccgtaccggatcaccggcctgccgccg
tcgcaggcgaacccggtcgcgcgcgtgctgctcgactggctcgcgttgccggaacggcag
gtcggcgcgccggagctggtcgaatggctgcgcgtggatgcggtggccgcgcgctacgac
atcgacgcggccgcgctcgaaaccgtgcagacctggctcgcggccgccggcgcgcggcgc
gggctgtcgccgcgcgcgagcgacgacgcggccgtgcccgcgccgcgccatacgttctcc
gatgcgctcgcgcgcctctttctcggctatgcgatgcccgaaggcgcggcgccgatcggc
gcgtggctgccgatcgaggcggccaccggcagcgaggccgaactgctcggccggctcgca
cgtttcaccgacgatctcgacggcttcgcgcggcggctcgccgagtcgcacacgccgcgc
ggctggagcgaactgtttgccgacacgctcgcgcgcttcttcgattcgggcgctgcgtat
gccgatgcgctggccggcgtgcgcgacgcgctcgacgcgatgctggccgcgatgacggaa
ggtgcgccggacgaggcgttgccggcggccgtcgtgcgcgcggggctcgccgcggcgctc
gacgatccggcccgcggcggggtgccgtggggtggcgtcacgttctcgtcgctgacgagc
ttgcgcgggctgccgtatcgcgtcgtctgcctgctcgggatggacgacggcgtgctgccg
agtctcgcgcgcgcggatgaattcgacctgatggccgtgctgccgaagctgggcgaccgg
cagcgtcgcgacgacgagcgcaatctgtttctcgacctgttgctcgccgcacgcgaccgc
ctgctgatcgcctatacgggccgcagcatccgcgacaatgcgccgttgccgcccgcggcg
ctcgtcgacgaactgctcgatcatctggcgatcgtcacggccgggcccggcgccgcaccg
gatgcggtcgatgccgcgcggcgcgcgttcatcgtcgaacatccgctgcaaccgttcgcg
gccgcgtacttccaactgggcagcgaactcgtttcgtacgatgccgagcgggcgacactc
gcgtcgctgctggccgccgaagcgtcgcgcggccagccgcgcgagcagccgttcttcgcg
cagccgctgccggccgagccggtcgagcccgtcgcgttcagcgagttcgaacgtttctgg
cggcatccggcgcgtgcgttgctgcgcggccggctcggcatcgtgctgaccgacgcgcag
gcggaactgctcgataccgagccattcgcgctggactttgccggtagcgacgcgctggcc
gagcgcgtgctgccgctcctgatcgaagcaggcgagggtggcgtgcacgatcacgcgctg
cgcattgcggacgcgagccccgaactgcccggcggcgcgacgggcgcggtgtggcgcgac
caggcgctcggttcgatgacgcagcttgcgtcgaacgtgcgccgtgcgctggccgatggc
atcgagcggcggccgttctcgctccttgtcgtaccgaagtggcccgacaccgagcaggcg
ctgttcggcgccgacgacgcgatgctggcggccgacgcggtgagcgcgccgctcgaattg
cacggcacgctgaaccggctgacgccggccgggcaggtcatctaccgctatgcgcggccg
agcgcgcgcgactacctgtccgcgtggctcgcgcatctcgtctactgtgcgatcgagccc
ggcggcccgcgccgcacgctgtggttcggcagcggcggtgcgttcgagctgacgcccgtc
gcggcgccgctcgaacggctcgcgccgctggccgcgctgtttcgcgcggggcggcgcatg
ccgctgcggtttttcccgcgcagtgcgtgggcgcgagtatccgacggcgaggccaaggcc
gcgagcgtgtggatcaacgaacgggtcgtgagcgaggccgacgatccggccatcgcgatc
gcatggcgcggcgcgcatccgtcgctcgacgagccgttcggcacgctcgcgcggctcgtg
ttcgagccgctcgtcgagcatctgaaggaggtcgcatga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-BCM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

Download RDF

DBGET integrated database retrieval system