KEGG   Burkholderia orbicola: Bcenmc03_2809
Entry
Bcenmc03_2809     CDS       T00669                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
bcm  Burkholderia orbicola
Pathway
bcm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bcm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Bcenmc03_2809
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bcm03400]
    Bcenmc03_2809
Enzymes [BR:bcm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Bcenmc03_2809
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Bcenmc03_2809
DNA repair and recombination proteins [BR:bcm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Bcenmc03_2809
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS C1_2 Auto_anti-p27 RNHCP
Other DBs
NCBI-ProteinID: ACA91968
UniProt: B1JYP5
Position
1:complement(3128804..3129787)
AA seq 327 aa
MRMPEIARLACRQAGDFGHSRVSFGVAARTAVLVAPHARSPCKQTVASDPQNMPELPEVE
VTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYLLFEVDAGW
FIVHLGMTGTLRVLPAAGVPVAAKHDHIDWIFDEFVLRFRDPRRFGAVLWHPREAGDVHA
HPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVVGVGNIYASESLFRAGIR
PTTAAGKVSLPRYERLADAVRATLADAIERGGSTLRDFVGSNGESGYFQLDCFVYDRAGQ
PCRVCGTPVRQIVQGQRSTYFCPTCQR
NT seq 984 nt   +upstreamnt  +downstreamnt
atgcgaatgcccgaaatcgcccgcctcgcgtgccgccaggcgggcgatttcgggcattcc
cgtgtttcattcggggtcgccgcgagaacggccgttctcgtggcgccgcatgcgcgttca
ccctgtaaacagaccgtagcctcagacccgcaaaacatgccagagttgccagaagtcgaa
gtcacgcgccggggcatcgagccctttgtcgcgggccgccgcgtcgagcgtgtcgacgtc
cgtaccgcgatgctgcgctggcccgtgccggcggggctcgccgagcagttgcgcgcgcgc
gaggtgctcgccgtcgagcgccgcggcaagtacttgctgttcgaggtcgatgcgggctgg
ttcatcgtccatctcgggatgacgggcacgttgcgcgtgttgcccgcggccggcgtgccg
gtcgccgcgaagcacgaccacatcgactggatcttcgacgaattcgtgctgcgcttccgc
gatccgcgccgtttcggcgccgtgctgtggcacccgcgcgaagcaggcgacgtgcatgcg
catccgctcctcgcgagcctcggcgtcgagccgttctcgccggcgttcaccggcgcgctg
ctgcatgcgcgcacgcgcggccgtacggtgtcggtcaagcaggcgctgctcgcgggcgac
atggtcgtcggtgtcggcaacatctatgcgtcggagagcctgtttcgcgccggcatccgg
ccgacgacggccgccggcaaggtttcactgccgcgctacgagcggctggccgacgcggtg
cgcgcgacgctcgccgacgcgatcgagcgcggcggcagcacattgcgcgatttcgtcggc
agcaacggcgaaagcggctacttccagctcgactgcttcgtctacgatcgtgccggccag
ccgtgccgcgtttgcggcacgccggttcgccagatcgtgcagggtcagcggtcgacctat
ttctgcccgacgtgccagcgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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