KEGG   Burkholderia cenocepacia AU1054: Bcen_2184Help
Entry
Bcen_2184         CDS       T00363                                 

Definition
(GenBank) Formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.23 4.2.99.18)
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
bcn  Burkholderia cenocepacia AU1054
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:bcn00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Bcen_2184
Enzymes [BR:bcn01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Bcen_2184
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Bcen_2184
DNA repair and recombination proteins [BR:bcn03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Bcen_2184
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
Position
1:complement(2409949..2410776)
Genome map
AA seq 275 aa AA seqDB search
MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL
LFEVDAGWFIVHLGMTGTLRVLPAAGVPVAAKHDHIDWIFDEFVLRFRDPRRFGAVLWHP
REAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVVGVGNIYASE
SLFRAGIRPTTAAGKVSLPRYERLADAVRATLADAIERGGSTLRDFVGSNGESGYFQLDC
FVYDRAGQPCRVCGTPVRQIVQGQRSTYFCPTCQR
NT seq 828 nt NT seq  +upstreamnt  +downstreamnt
atgccagagttgccagaagtcgaagtcacgcgccggggcatcgagccctttgtcgcgggc
cgccgcgtcgagcgtgtcgacgtccgtaccgcgatgctgcgctggcccgtgccggcgggg
ctcgccgagcagttgcgcgcgcgcgaggtgctcgccgtcgagcgccgcggcaagtacctg
ctgttcgaggtcgatgcgggctggttcatcgtccatctcgggatgacgggcacgctgcgc
gtgctgcccgcggccggcgtgccggtcgccgcgaagcacgaccacatcgactggatcttc
gacgaattcgtgctgcgcttccgcgatccgcgccgcttcggcgccgtgctgtggcacccg
cgcgaagcaggcgacgtgcatgcgcatccgctcctcgcgagcctcggcgtcgagccgttc
tcgccggcattcaccggcgcgctgctgcatgcgcgcacgcgcggccgcacggtgtcggtc
aagcaggcgctgctcgcgggcgacatggtcgtcggtgtcggcaacatctatgcgtcggag
agcctgtttcgcgccggcatccggccgacgacggccgccggcaaggtttcgctgccgcgc
tacgagcggctggccgacgcggtgcgcgcgacgctcgccgacgcgatcgagcgcggcggc
agcacattgcgcgatttcgtcggcagcaacggcgaaagcggctacttccagctcgactgc
ttcgtctacgatcgtgccggccagccgtgccgcgtttgcggcacgccggttcgccagatc
gtgcagggtcagcggtcgacctatttctgcccgacgtgccagcgttga

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