KEGG   Heyndrickxia coagulans DSM 1 = ATCC 7050: BF29_145
Entry
BF29_145          CDS       T03712                                 
Symbol
rnhB
Name
(GenBank) ribonuclease HII
  KO
K03470  ribonuclease HII [EC:3.1.26.4]
Organism
bcoa  Heyndrickxia coagulans DSM 1 = ATCC 7050
Pathway
bcoa03030  DNA replication
Brite
KEGG Orthology (KO) [BR:bcoa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BF29_145 (rnhB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bcoa03032]
    BF29_145 (rnhB)
Enzymes [BR:bcoa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     BF29_145 (rnhB)
DNA replication proteins [BR:bcoa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    RNase H
     BF29_145 (rnhB)
   Elongation factors (archaeal)
     BF29_145 (rnhB)
SSDB
Motif
Pfam: RNase_HII DUF5106 ARMT1-like_dom CV_2116-like DUF327
Other DBs
NCBI-ProteinID: AJH77435
Position
143956..144723
AA seq 255 aa
MKISDIEARLSEMTNPSDPFVQKLRRDERKGAQKALEKWMRKLEKEREQLEKFREMARFE
DALRSHGYRLIAGIDEAGRGPLAGPVVAACVILPEDFCLPGLNDSKQLSEKQREAFFAHI
QEEALVGVGFASAEEIDRMNVYEAAKKAMLAALGHLPASPDHLLIDAMEIPAPYPQTSIV
KGDAKSISIAAASVIAKVTRDRYMREMDEKYPGYGFAIHKGYGTKKHLEAIMKLGPCPIH
RKSFAPIKDRPAIRR
NT seq 768 nt   +upstreamnt  +downstreamnt
ttgaaaatcagtgatattgaagcgcggctttcagaaatgacaaatccgtccgatccgttc
gtccagaagttgcgccgggatgaacggaaaggcgcacaaaaagcgctggaaaaatggatg
agaaaattagaaaaagagcgtgaacagcttgaaaaattccgggagatggcccgatttgaa
gacgccctgcgcagccacggctaccgcctgatcgccggaattgacgaggcaggcaggggg
ccgcttgccggtccggttgtagccgcttgcgtcattcttccggaagatttttgcctgccc
ggactgaacgattccaaacagctttccgaaaaacagcgggaggccttttttgcgcacatt
caggaggaagcccttgtcggcgtcggctttgccagtgcagaagaaattgaccgaatgaat
gtttacgaggcggccaaaaaggcgatgcttgcggctttgggccatttgcccgcttctccg
gaccatttgctgatcgatgcgatggaaattccggccccgtacccgcaaacttcgattgta
aaaggggatgcgaaaagtatttcaattgccgcggcttccgtgattgcaaaagtaacgaga
gaccggtatatgcgggaaatggatgaaaaatatcccgggtacggtttcgccatacataag
ggctatgggacgaaaaaacatctggaagcgatcatgaagcttggcccatgcccgatccat
agaaaatcgtttgcgccgattaaagacaggccggcaatccgccgataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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