KEGG   Baudoinia panamericana: BAUCODRAFT_138202
Entry
BAUCODRAFT_138202 CDS       T03106                                 
Name
(RefSeq) hypothetical protein
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
bcom  Baudoinia panamericana
Pathway
bcom03018  RNA degradation
bcom03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bcom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    BAUCODRAFT_138202
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BAUCODRAFT_138202
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcom03019]
    BAUCODRAFT_138202
   03041 Spliceosome [BR:bcom03041]
    BAUCODRAFT_138202
Messenger RNA biogenesis [BR:bcom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     BAUCODRAFT_138202
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     BAUCODRAFT_138202
Spliceosome [BR:bcom03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    BAUCODRAFT_138202
 Complex C
  U2 snRNP components
    BAUCODRAFT_138202
SSDB
Motif
Pfam: LSM DUF150_C
Other DBs
NCBI-GeneID: 19108344
NCBI-ProteinID: XP_007675068
JGI: Bauco1_138202
UniProt: M2MP32
Position
Unknown
AA seq 95 aa
MADTEEPGADPVNEPLDLVRLSLNETVFVKLRGDRELQGRLHAYDSHCNLVLGEVTETIY
QVAEEAGGEDVRTLKKQSEMLFVRGDSVVLISPQQ
NT seq 288 nt   +upstreamnt  +downstreamnt
atggccgacacagaagaacctggcgcagacccggtgaacgagcctctggacttggtacgt
ctgtcgctcaacgaaacagtattcgtgaagcttcgaggagatcgcgagcttcaaggaaga
ctccatgcttacgacagccattgcaatttggtgctcggggaagtgacggagacgatctat
caagtggctgaggaagccggaggtgaagatgtccgaaccctgaagaagcagtctgagatg
ctcttcgtgagaggtgattccgtggtactcatatcgccacagcaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (29)   

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