KEGG   Blattabacterium Cpu (Cryptocercus punctulatus): BLBCPU_170
Entry
BLBCPU_170        CDS       T01660                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
bcp  Blattabacterium Cpu (Cryptocercus punctulatus)
Pathway
bcp03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bcp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BLBCPU_170 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bcp03021]
    BLBCPU_170 (rpoB)
   03400 DNA repair and recombination proteins [BR:bcp03400]
    BLBCPU_170 (rpoB)
Enzymes [BR:bcp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BLBCPU_170 (rpoB)
Transcription machinery [BR:bcp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BLBCPU_170 (rpoB)
DNA repair and recombination proteins [BR:bcp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BLBCPU_170 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1
Other DBs
NCBI-ProteinID: AEU09226
UniProt: G8LRK3
Position
173253..177080
AA seq 1275 aa
MVNIEKFSEKSEERITFASVKKQVEYPDLLDIQIKSFKDFFQLDTKPENRKNEGLFKAFT
ENFPISDARNSFVLEFKGYSIDSPRYSIEECIERGLTYSVPLKAKLKLYCTDPEHEDFET
VYQDVYLGTYPYMTPSGSFIFNGSERVIVSQLHRSPGVFFGQSHHANGTKLYSARIIPFK
GSWIEFATDINNIMYAYIDRKKKLPMTTLLRAIGYERDKDILEIFNLAEEVKIIENNQNI
LDRTIAARILKIWHEDFVDEDTGEVVSIEKNKILIDRDIILKQEHIDIIIQNEIKTILLH
KEGGKKKDYSIIYNTLQKDPTNSEKEAVEYIYRQLRNTEPPDEETAKGIIDKLFFSDSRY
SLGPVGRYRLNKRLSLDIDPNYLVLTKEDIIAIVEHLNALFNSKKEVDDIDHLSNRRVKT
VGEQLYTQFSIGLSRMARTIRERMNVRDNEVFMPIDLINSKTLSSVINVFFGTNQLSQFM
DQTNPLSEITHKRRLSALGPGGLSRERAGFEVRDVNYSHYGRLCPIETPEGPNIGLISSL
SVFAKINNMGFVETPYRFTSNGKVNLKSKIKYLSAEEEEGKVISQANSIDKSGNFISDRI
IARKDGDFPIVKPKQVDYIDVAPNQIASISASLIPFLEHDDANRALMGSNMMRQAVPLLN
PESPIVGTGLEKQIAIDSRILINAEKNGIVEYIDAKKIIIRYDQTEKEKLVSFNSEIKVY
DLIKFRKTNQNTCITLKPIVKKGMRIVKGEILCEGYATENGELALGRNLRAAFIPCNGYN
FEDAVLISEKVVSEDWFTSIHIDEYSLDVRDTKLGMEELTNDIPNVSEEATKDLDENGII
RVGAEVKPGDILIGKITPKGESDPTPEEKLLRAIFGDKAGNVKDASLRAEPSLFGIVIDT
KLFTRSIKDKKSRAQDKIKIDYLEKEYDKKFLDLKNNFLKKLYTVLHGKVSKKIFLDEKK
QKFIEKGTKFSLKLLNSISDYINISPYNWTFDVEINNIISEILHNYKISFNDLNSIMKHK
KFSITIGDELPSGIIKMAKVYIAKKRKLKVGDKMAGRHGNKGVVARILREEDMPFLEDGS
PVDIVLNPLGVPSRMNIGQIYETVLGWAGYKLGIKFSTPIFDGASIEKITEYTKKAGIPN
FGTTYLFDGGTGERFDQPATVGIIYMLKLGHMVDDKMHARSIGPYSLITQQPLGGKAQFG
GQRFGEMEVWALEAFGASNILREILTVKSDDVIGRAKTYESIVKGDPIPEPNNPESFNVL
CYELKGLGLDINLEE
NT seq 3828 nt   +upstreamnt  +downstreamnt
ttggtaaatatagaaaaattttcagaaaaatcagaagaaagaattacttttgcatcagta
aaaaaacaagtagaatatcctgatttattggatattcaaataaaatcatttaaagatttt
tttcaacttgatacaaaaccagaaaatagaaaaaatgaaggtttatttaaagcttttacc
gaaaattttccaatttcagatgcaagaaattcttttgttttagaatttaaaggatattcc
atagattctcctagatattctatagaagagtgtatagaaagaggattaacttatagtgtc
cctttaaaagctaaattaaaattatattgtacagatcctgaacatgaggattttgaaact
gtatatcaagatgtatatttaggtacttatccatatatgactccttctggatcttttatt
tttaatggatcagaacgggtaattgtatctcaattacatcgttcgccaggagtttttttt
ggtcagtcccatcatgcaaatggaactaaattatattccgcaagaattattccttttaaa
ggatcttggattgaatttgctacagatatcaataatattatgtatgcgtatattgataga
aagaaaaaattaccaatgacgactttacttcgtgctattggatatgaaagagataaagat
atattagaaatatttaatctagcggaagaagttaaaataatagaaaataatcagaatatt
ttagatagaactattgctgctagaatattgaaaatatggcatgaagattttgtagatgaa
gatactggtgaagtagtctccatagaaaaaaataaaattttaatagatagagatattatt
ctaaaacaagagcatatagatattattattcaaaatgaaataaaaacaattcttttgcat
aaagaaggaggaaaaaaaaaagattattctattatttataatactttacaaaaagatcct
actaattctgaaaaagaagctgtagaatatatatatagacaacttagaaataccgaacct
cctgatgaagaaactgctaagggaattatagataaactttttttttcagattctagatat
agtttaggacctgttgggagatatcgtttaaataaacgtcttagtttagatatagatccc
aattatttagttttaactaaagaagatattattgctatagttgaacatttgaatgcattg
tttaattctaaaaaagaagtagatgatattgatcatctatctaatagacgtgtaaaaact
gtcggagaacaactttatactcaatttagtattggattatctagaatggctagaactatt
agagagagaatgaatgttcgagataatgaagtttttatgcctatagatttgattaattct
aaaacattatcttccgttataaatgttttttttggaactaaccaattatctcaatttatg
gatcaaacaaatccattatctgaaataactcataaaagaagattatcagctttagggcca
ggtggattatctagagaaagagctggatttgaggttagagatgtaaattattctcattat
ggaagattatgtccaattgaaactccagaaggtcctaatattggtttaatttcttctctt
tctgtttttgcaaaaattaataatatgggatttgtagaaactccttatagatttactagt
aatggaaaagtaaatttaaaatctaaaattaaatatttaagtgcagaagaagaagaaggt
aaagtaatttcacaagctaattctatagataaatctggaaattttatatctgaccgaatt
attgctcgtaaagatggtgattttccaatagtaaaaccaaaacaagtagattatatagat
gtagcacctaatcaaatagcttctatttcagcttctttaattccttttttggaacatgat
gatgctaatagagcacttatgggatctaatatgatgcgtcaagccgttccattattaaat
cctgaatcacctattgttggaactggattggaaaaacaaatagcaatagattctcgaatt
ttaattaatgcagaaaaaaatggaatagtagaatatattgatgcaaaaaaaataattatt
cgttatgatcaaacggaaaaagaaaaattagtaagctttaattccgaaattaaagtttat
gatttaataaaatttagaaaaacaaatcaaaatacatgtattactttaaaacctattgtt
aaaaaaggaatgaggatagtaaaaggggaaattttatgtgaaggatatgcaactgaaaat
ggagaattagcattaggaagaaatttaagagcagcttttattccttgtaatggatataat
tttgaagatgctgtactaatttcagaaaaagtagttagtgaagattggttcacatcaata
catatagatgaatattctttagatgtacgggatacaaaattagggatggaggaattaaca
aatgatattccaaatgttagtgaggaggctactaaagatttggatgaaaatggaattatt
cgtgttggagctgaagttaaacctggggatattcttattggaaaaataactccaaaagga
gaatcggatccaacaccagaggaaaaattattaagagctatttttggcgataaagctgga
aatgtaaaagatgcttctttaagggcagaaccttctttatttggtattgtaattgacaca
aaattatttactagaagtataaaagataaaaaatctagagctcaagataaaataaaaata
gattatctagaaaaagaatacgataaaaaatttttagatttaaaaaataattttttaaaa
aaattatatacagttttacatggaaaagtttctaaaaaaatttttttagatgaaaaaaaa
caaaaatttatagaaaaaggtacaaaatttagtctaaaactattaaatagtatatctgat
tatataaatatttctccatataattggacttttgatgtagaaattaataatattatatca
gaaatattgcataattataaaatatcatttaatgatttaaatagtattatgaaacataaa
aaattttctattactatcggagatgaattaccttctggaattattaaaatggctaaagtt
tatattgcaaaaaaaagaaaattaaaagtaggagataaaatggcaggtagacatggtaat
aaaggagttgtagcacgtattcttcgtgaagaagatatgccttttttagaagatggtagt
ccagtagatattgtattaaatccattaggagttccgtctagaatgaatattggacaaata
tatgaaacagtattaggttgggcaggatataaattaggtattaaattttctacccctata
tttgatggagctagtatagaaaaaataacagaatatacaaaaaaagcgggtatcccaaat
tttgggactacttatttatttgatggagggacaggagaaagatttgatcaacctgcaaca
gttggtattatatatatgttgaaattaggtcatatggtagatgataaaatgcatgctcgt
tccataggtccatattcacttataactcaacaacctttaggaggaaaagctcaatttgga
ggtcaacgttttggagaaatggaagtttgggctttagaagcttttggagcatctaatatt
ttacgtgaaatattaactgtcaaatcagatgatgtaataggaagagctaaaacttatgaa
tctatagttaaaggagatccaattccagaaccaaataatccagaatcttttaatgtttta
tgttatgaattaaaaggattaggtttggatattaatttagaagagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system