KEGG   Burkholderia cepacia: GEM_0643Help
Entry
GEM_0643          CDS       T02205                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
bct  Burkholderia cepacia
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:bct00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    GEM_0643
Enzymes [BR:bct01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     GEM_0643
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     GEM_0643
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
1:713116..713943
Genome map
AA seq 275 aa AA seqDB search
MPELPEVEVTRRGIEPFVAGRRVERVDVRTAMLRWPVPAGLAEQLCAREVIAVERRGKYL
LFEVDAGWFIVHLGMTGTLRVLPAADVPVAAKHDHIDWIFDEFVLRFRDPRRFGAVLWHP
REAGDVHAHPLLASLGVEPFSPAFTGALLHARTRGRTVSVKQALLAGDMVVGVGNIYASE
SLFRAGIRPTTAAGKVSLPRYERLADAVRATLADAIERGGSTLRDFVGSNGESGYFQLDC
FVYDRAGLPCRVCGTPIRQIVQGQRSTYFCPTCQR
NT seq 828 nt NT seq  +upstreamnt  +downstreamnt
atgccagagttgccagaagtcgaagtcacgcgccggggcatcgagccctttgtcgcgggc
cgccgcgtcgagcgtgtcgacgtccgtaccgcgatgctgcgctggcccgtgccggcgggg
ctcgccgagcaattgtgcgcgcgcgaggtgatcgccgtcgagcggcgcggcaagtacctg
ctgttcgaggtcgacgcgggctggttcatcgttcatctcgggatgacgggcacgctgcgc
gtgctgcccgcggccgacgtgccagtcgccgcgaaacacgatcacatcgactggatcttc
gacgagttcgtgctgcggttccgcgatccgcgccgtttcggcgccgtactgtggcacccg
cgcgaagcgggtgacgtgcatgcgcatccgctgctcgcaagcctcggcgtcgagccgttc
tcgccggcctttaccggcgcgctgctgcatgcgcgcacgcgcggtcgcacggtctcggtc
aagcaggcgctgctcgcgggcgacatggtcgtcggcgtcggcaacatctatgcgtcggag
agcctgtttcgcgccggcatccggccgacgaccgcggccggcaaggtgtcgctgccgcgc
tacgagcggctcgccgacgcggtgcgcgccacgctcgccgacgcgatcgagcgcggcggc
agcacgctgcgcgattttgtcggcagcaacggcgaaagcggctatttccagctcgactgc
ttcgtctacgaccgtgcgggtttgccttgccgcgtatgcggcacgccgatccggcagatc
gtgcagggccagcgctcgacctatttctgcccgacctgccagcgttga

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