KEGG   Bacillus cytotoxicus: Bcer98_2520
Entry
Bcer98_2520       CDS       T00560                                 
Name
(GenBank) primosomal protein N'
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
bcy  Bacillus cytotoxicus
Pathway
bcy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bcy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Bcer98_2520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bcy03400]
    Bcer98_2520
Enzymes [BR:bcy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Bcer98_2520
DNA repair and recombination proteins [BR:bcy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Bcer98_2520
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII Helicase_C PriA_CRR PIF1 ADDB_N ATPase_2 AAA_19 AAA_30 UvrD-helicase zinc-ribbons_6 TrwB_AAD_bind T2SSE SLFN-g3_helicase RecA DUF643
Other DBs
NCBI-ProteinID: ABS22756
UniProt: A7GRJ8
Position
complement(2618860..2621265)
AA seq 801 aa
MKFASVIVDVPARQTDRPFDYIIPNKWEDIVQTGMRVVVPFGPRKLQGFIIDIKDSVDVE
IKKLKSLHEILDVTPVLNEELLKLGFWLTEETLCYTISAFQVMLPTAIKATYKKLLQLHN
PNEVSAEIDHLFQGKDRIDWEEVASQPQLYRMVQKEITNGTVEVIYKVKDKVQKKKQRVV
QPELQEEGLEAAAFELKSKKQQDILYYFMENYHTVPLKVLKEELQITDAPIKSLVKKGLL
SEKYIEVYRNPYDEDDFEKTKPFPLTDEQKQVITPILSAITNETYKSFLLYGVTGSGKTE
VYLQSIAAVLEKGKEAIVLVPEIALTPQMVERFKGRFGSQVAVLHSALSVGEKYDEWRKI
LRKEVKVVVGARSAIFAPFENLGIIIIDEEHEASYKQEDNPRYHARDVAIWRGRYHCCPI
VLGSATPTLESFARAKKGVYELLTMEKRMNEQALPTVNIIDMREELRDGNRSMFSRTLHE
KIADRLKKKEQMVLFLNRRGHSTFVMCRDCGYVVQCPHCDISLTYHKMNYRLKCHYCSYE
EQMPTACPACNSSHIRFFGTGTQKVEEELTKLFPEARVIRMDVDTTSRKGMHEKLLKAFG
EEKADILLGTQMIAKGLDFPKVTLVGVLTADTMLHLPDFRASEKTYQLLTQVSGRAGRHD
LPGEVVIQTYTPEHYSIELAKGQNYDLFFEQEMQMRRMRQYPPYYYVALVTVSHPELLKA
VQVTEKIVGYLRANCSRQTMVLGPVASPIPRIKDRYRYQCMIKYKREPNLKYVLKMVNEH
YQAEMQKDLQISIDFNPTVLM
NT seq 2406 nt   +upstreamnt  +downstreamnt
atgaaatttgcgagtgtaattgttgatgtgccggcccgtcaaacagataggccgtttgac
tatatcattcctaacaagtgggaagatattgtgcaaactggtatgcgagtcgttgttccg
tttggaccgcgaaagttacaaggatttattatcgacataaaggactctgtagatgtagaa
attaaaaaattaaaatcattacatgaaatattagacgtcacaccagttctaaatgaagag
ctactaaagcttggcttttggcttacggaagagacgttatgctatacaatttctgctttt
caagtgatgcttccaactgcaattaaagctacttacaagaaattgttacagcttcataat
ccgaatgaagtttccgccgaaatagatcacttatttcaagggaaagatagaatagattgg
gaagaagttgcttcgcagccacagctatatcgcatggtgcaaaaagaaattacaaacggt
acagttgaagtaatttataaagtaaaggataaagtgcaaaagaaaaaacaaagagttgtt
cagcctgaattacaagaggaaggactagaagcggcggcgtttgaattgaaaagtaaaaaa
caacaagatatactatattattttatggaaaattaccacactgtaccattaaaagtattg
aaagaagaattgcaaataacagatgctcccattaaatcgctcgtaaaaaaaggtttattg
tctgaaaaatatatagaggtatatcgtaatccttatgatgaagatgattttgagaagacc
aaaccatttccattaacagatgaacaaaagcaagtgattacacccattttgtcagctatt
acaaatgaaacttacaaatcatttttactatatggagtcacaggaagcggaaaaacagaa
gtgtatttacagtcaatcgctgcggtattagaaaaaggaaaagaagcgattgtacttgtt
ccggaaattgccctaacaccgcaaatggtagagcgtttcaaagggcgattcggttcgcaa
gttgcggttcttcatagcgcactttctgttggagaaaaatatgatgagtggcggaaaatt
ttaagaaaagaagtaaaagttgtagttggtgcacgttctgcgatttttgctccatttgaa
aacttagggattattattattgatgaagagcatgaagcaagttataagcaagaggataat
ccgagatatcatgctagagatgttgcaatttggagaggacgatatcattgttgtccaatc
gtgcttggtagtgccacaccgacacttgaatcgtttgctagggcgaagaaaggtgtttac
gagctgttaacgatggagaagcgaatgaatgagcaagcattgcctacggtaaatattata
gatatgcgtgaagaacttcgcgatggcaatcgttctatgttctctagaacattacatgaa
aaaattgctgatcggttaaagaaaaaggaacaaatggtgcttttcttaaatcgccgcgga
cattctacatttgtgatgtgccgagattgtggttatgtagtacaatgtcctcactgtgat
atatcacttacgtatcataaaatgaattatcgtttaaagtgccactattgtagttatgag
gaacagatgccaacagcttgtccggcatgtaatagttcgcatattcgtttttttggtaca
ggaacacaaaaggtggaagaagaattaacaaaattattcccagaggcacgagtgattcga
atggatgtggatacaacaagtcgtaagggaatgcatgaaaaactattaaaagcatttgga
gaagaaaaagccgatatcttacttggtacacaaatgatcgcaaaaggattagattttccg
aaagtgacgcttgttggtgttctaacagctgatacaatgcttcatttgccggattttagg
gcgagcgaaaaaacgtatcaactattaacacaagttagcggcagagccggacgtcacgac
ttgccaggagaagtggtgattcaaacatatacaccggaacattatagtatagagctggca
aaaggccaaaactatgatttattttttgaacaggaaatgcaaatgagaagaatgaggcaa
tatccaccatactattatgtcgcacttgtcactgtatcgcatccggagttattaaaggca
gtgcaggtgacagaaaaaattgtcggctatttacgggcaaactgttcgcggcaaacgatg
gtcttaggtccagttgcgtcgccgattccaaggataaaagatagatatcgttatcaatgc
atgataaaatacaaacgggaaccaaacttaaagtacgtactcaaaatggtaaatgaacat
tatcaagcagaaatgcaaaaggacttacaaatctcaattgattttaatccaacggtgtta
atgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (28)   

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