KEGG   Bifidobacterium dentium Bd1: BDP_0739
Entry
BDP_0739          CDS       T01143                                 
Symbol
carB
Name
(GenBank) carB Carbamoyl-phosphate synthase large chain
  KO
K01955  carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
Organism
bde  Bifidobacterium dentium Bd1
Pathway
bde00240  Pyrimidine metabolism
bde00250  Alanine, aspartate and glutamate metabolism
bde01100  Metabolic pathways
bde01240  Biosynthesis of cofactors
Module
bde_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:bde00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    BDP_0739 (carB)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    BDP_0739 (carB)
Enzymes [BR:bde01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.5  carbamoyl-phosphate synthase (glutamine-hydrolysing)
     BDP_0739 (carB)
SSDB
Motif
Pfam: CPSase_L_D2 CPSase_L_D3 MGS Dala_Dala_lig_C ATP-grasp ATPgrasp_Ter ATP-grasp_4 GARS_A ATP-grasp_2
Other DBs
NCBI-ProteinID: ADB09400
UniProt: D2Q9B4
Position
849487..852867
AA seq 1126 aa
MPKRTDIKSVMVVGSGPIVIGQAAEFDYSGTQACRVLREEGIRVILVNSNPATIMTDPEM
ADATYIEPISTPILEQIIAKERPDALLPTLGGQTALNAAMALGEAGVLKKYDVELIGASL
EAIDRGEDRELFKKVVEEAGAESARSDIAHSIEEVDRIAEKFGYPLVVRPSFTMGGLGSG
IAHDEEELHRIAGAGIHYSPTDEVLIEEGIEGWKEYELELMRDKKDNVVVVCPIENVDPV
GVHTGDSITVAPVFTLTDREYQKLRDIGIAIIRGVGVDTGGCNIQFAIHPDTGRIIVIEM
NPRVSRSSALASKATGFPIAKIATKLALGYTLDEIQNDITQSTPASFEPTIDYVVTKVPR
FAFEKFPGADPTLTTSMKSVGEAMALAGNFQESLGKAMRSIDKRHMGFNWDGDKPSAEEV
EQLLEAIKVPTEHRYLQIQRALWGGATEEQIFAATKIDPWFIRQFELINETALEVRNAEK
LTGRLLKKAKLAGLSDLQIAHLRHLGDEGENTIRELRWTYDLRPVFKTVDTCAAEFDAAT
PYYYSCYADETELRPRDREAVIILGSGPNRIGQGIEFDYTCVHAVQELGKDYDTIMVNCN
PETVSTDYDMSDRLYFEPLTFEDVLEIYEAEKKMGPVKGVIVQLGGQTPLSLAARLKAAG
VPILGTTPESIDLAENRELFGEVLKKADMNAPRYGTALSLEEAREAAHGIGYPVLVRPSY
VLGGRGMEIVYDDAQLRKYVDRALREAQADTVVSGRLPSPLLIDKFLQDAVEIDVDALFD
GEELYIGGIMEHVEEAGVHSGDAACTLPPSTLSDDQIRRLREGTYAIAKGCGVQGLINVQ
YAFMANTLYVIEANPRASRTVPFASKATGVALAKAAARIMAGETIQQQRDNGLLLPHGDG
GDIRRGQQVAVKESVLPFKRFRTSLGKTVDVLLGPEMRSTGEVMGFDRDFPHAFAKSQLA
AYDGGLPTSGNVFISVNDTDKRQLPLFAARLVELGFNIWATEGTASVLRRYGIDSKIVDK
ISVRMDSDPEDPVTTYHAEGSVGKNVVQLIEEGAIDLILNTPNSRGSRSDGYAIRSAAIA
ADLPQFTTMTEFSAVLMAIEAVKNNDYQIMSIQDHSKQLFELESRE
NT seq 3381 nt   +upstreamnt  +downstreamnt
atgcctaagcgcacagacatcaagtccgtgatggtcgtcggctccggcccgattgtgatc
ggccaggccgcggaattcgattattcgggcacccaggcctgccgcgtgcttcgtgaagag
ggcattcgcgtcattctggtcaactcgaatccggccaccatcatgaccgatccggaaatg
gccgacgccacctacatcgaaccgatctccaccccgattctcgaacagatcatcgccaaa
gaacgtcctgacgcactgctgccgacgctcggcggccagaccgccctgaacgccgccatg
gctctcggtgaggccggtgtgctgaagaagtacgacgtcgagctgattggtgcctccctc
gaggccatcgaccgcggcgaggaccgcgaactgttcaagaaggtcgtggaggaggccggc
gccgaatccgcacgttccgacatcgcgcactccatcgaggaagtcgacaggatcgccgaa
aagttcggctatccgctggtcgtccgcccgagcttcaccatgggcggccttggttccggc
atcgcgcacgacgaagaggagttgcaccgcatcgccggtgccggcatccattattcgccg
actgacgaggtcctgatcgaagagggcatcgagggctggaaggaatatgagctcgagctg
atgcgcgacaagaaggacaacgtcgtggtcgtctgcccgatcgaaaacgttgatccggtc
ggcgtgcacaccggcgactccatcaccgtggccccggtcttcactctgaccgatcgcgaa
taccagaagctgcgcgatatcggcatcgccatcatccgtggcgtgggcgtcgacaccggt
ggctgcaacattcagttcgcaatccaccctgataccggccgtatcatcgtcatcgagatg
aacccgcgtgtgtcccgttcgtccgcgctggcttccaaggccaccggcttcccgatcgcc
aagatcgcgaccaagctggctcttggctacacgctcgatgaaatccagaacgatatcacg
cagtccactccggccagcttcgagccaaccatcgactacgtggtcaccaaggtgccgcgc
ttcgcattcgagaagttcccgggtgccgacccgaccttgaccacctccatgaagtctgtc
ggcgaggccatggcactggccggcaatttccaggaatcccttggcaaggccatgcgctcc
atcgacaagcgtcatatgggcttcaactgggacggcgacaagccatccgccgaagaggtc
gaacagctgctcgaagccatcaaggtgccgaccgaacatcgctatctgcagattcagcgt
gccctgtggggcggtgccaccgaagagcagatcttcgcggccaccaagattgatccgtgg
ttcatccgccagttcgaactcatcaatgagaccgcattggaggtcaggaacgctgagaag
ctcaccggaaggctgctcaagaaggccaagctcgcaggtctgtccgatctgcagatcgct
catctgcgccacctcggcgatgaaggtgagaacaccatccgtgaactgcgctggacctat
gacctgcgtccggtgttcaagaccgtcgacacctgcgctgccgaattcgatgcggccacg
ccgtattactactcctgctatgccgatgagaccgaattgcgtccgcgtgatcgcgaggcg
gtgatcatcctcggttccggtccgaaccgcatcggccagggcatcgagttcgactatacc
tgcgtgcacgccgtgcaggagctgggcaaggactatgacaccatcatggtcaactgcaac
ccggaaaccgtgtcgaccgattatgacatgtccgatcgtctgtacttcgagccgctcacc
ttcgaagatgtgctggaaatctacgaagccgaaaagaagatgggtccggtcaagggcgtc
atcgtgcagctcggcggtcagaccccgctgtcgttggccgcgcgcctcaaggccgccggt
gtaccgattctcggcaccacgccggaatccatcgacttggccgagaaccgtgagcttttc
ggcgaggtgctcaaaaaggccgacatgaacgcgccgcgttacggtaccgcattgagcttg
gaagaggctcgcgaggctgcccatggcatcggctacccggtgctggtgcgcccgagctac
gtgcttggcggccgtggcatggaaatcgtctatgacgacgcccagctgcgcaagtatgtc
gaccgcgcccttagggaggcccaggccgataccgtggtctccggccgtctgccttcgccg
ttgctgatcgacaagttcctgcaggatgccgtggaaatcgacgtcgatgccttgttcgac
ggcgaggaactctacatcggcggcatcatggagcatgtcgaagaggccggcgtgcattcc
ggcgatgcggcctgcaccttgcccccgagcaccctgtccgacgaccagatccgtcgtctg
cgtgagggtacgtacgccattgccaagggatgcggcgttcagggcctgatcaacgtacag
tacgccttcatggccaatacgctgtatgtgatcgaagccaatccgcgtgcttcccgtacc
gtgccattcgcctccaaggccaccggtgtggctctggccaaggccgccgcccgcatcatg
gccggcgaaaccatccagcagcagcgagacaatggcctgttgctgcctcacggtgacggt
ggtgacatccgccgtggccagcaggtggccgtcaaggaatccgtattgccgttcaagcgt
ttccgtacctcgttgggcaagaccgtcgatgtgctgcttggaccggagatgcgttccacc
ggtgaggtcatgggcttcgaccgtgacttcccgcacgccttcgccaagagccagctcgcc
gcctacgacggaggcctgccgaccagcggcaacgtgttcatctccgtgaacgacaccgac
aagcgtcagctgccgctgttcgccgcccgattggtggagctcggcttcaacatctgggcc
accgaaggcaccgcctccgtactgcgccgctatggcatcgactccaagatcgtggataag
atcagcgtgcgcatggattccgatccggaagatccggtcaccacctaccacgcggagggc
agcgtcggcaagaacgtggttcagctgattgaggagggtgccatcgacctcatcctcaac
acgccgaattcccgtggctcccgctccgatggctatgccatccgttcggccgcgattgca
gccgatctgcctcagttcaccaccatgacggagttctccgccgtgctgatggcgatcgag
gccgtaaagaataatgattaccagatcatgagcattcaggatcattccaagcagctgttc
gaactggaaagccgtgagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (38)   

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