KEGG T01143: BDP

Bifidobacterium dentium Bd1: BDP_2236

Entry

BDP_2236          CDS       T01143

Symbol

spoU

Name

(GenBank) SpoU rRNA methylase family protein

K03218

23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]

Organism

bde Bifidobacterium dentium Bd1

Brite

KEGG Orthology (KO) [BR:bde00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bde03009]
    BDP_2236 (spoU)
Enzymes [BR:bde01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.185  23S rRNA (guanosine2251-2'-O)-methyltransferase
     BDP_2236 (spoU)
Ribosome biogenesis [BR:bde03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    BDP_2236 (spoU)

SSDB

Motif

Pfam:

SpoU_methylase SpoU_sub_bind

Other DBs

NCBI-ProteinID:

ADB10790

UniProt:

D2Q7M8

Position

2576220..2577209

AA seq 329 aa
MAMKKGPTKGSGGKHRNALRGKGPTPKAENRVYHKAYKAKKVADRRKMADPRLAARRRVA
KFASESDDLVIGRNAVLEALRCGVPASTLYIAARIEHDDRTREIVRLAGIHGLHLMEADR
LEMDRIARSSNHQGIVMKAQPFQYSSLAELVERADKKSRAMEAANSAAARIAARPLFIAL
DGVTDPQNLGAVIRSAAAFGANGVILPERRSASVTAAAWKVSAGAAAHMPVARVVNLTKA
IESLKERGYYSIGLDGGGDALVGETGFETDPLVVVLGSEGNGLSRLVRSTCDVIAGIPMS
SMVESLNASVAAGITLYAVARARREAANN

NT seq 990 nt +upstreamnt +downstreamnt
atggcaatgaaaaaaggaccgaccaaggggtcgggcggaaaacatcgtaatgcgctaagg
ggcaagggaccgactcccaaggccgagaatcgcgtatatcacaaggcctataaggccaaa
aaagtcgccgatcgccgtaaaatggccgatccgcgactggctgcacgccgtcgcgtggca
aagttcgcttcggaatccgacgatctggtcatcggtcgtaacgcggtgctcgaggcgctg
cgctgcggcgttccggcttcgacgctgtatatcgcggcacgcatcgaacatgatgatcgc
acacgcgaaatcgtgcgtctcgccggcattcacggcctgcatctcatggaggcggaccgt
ttggagatggatcgcatcgcacgctcttccaatcatcagggcatagtgatgaaggcacag
ccgttccagtattcgtcattggctgaactcgtggaacgcgcggacaagaagtcccgcgcc
atggaagccgcaaactcggcagccgcgcgcatcgcggcccgtccgctgttcatcgcgctc
gacggcgtcaccgacccgcagaatctgggcgcggtcatccgttccgcagcggcattcggt
gccaatggcgtgattctgccggagcgtcgttccgcttcggttacggccgccgcctggaag
gtgtccgccggcgcggccgcgcatatgccggtcgcccgtgtagtgaatctgaccaaggcg
atcgaaagcctgaaggaacgcggttattacagcatcggtcttgacggcggcggcgatgcg
ctcgtcggcgaaaccggttttgaaaccgatccgctcgtcgtcgtgcttgggtccgaaggc
aatggcctgagccgtctggtgcgcagcacatgcgacgtcatcgccggtattccgatgtcg
agcatggtcgagtcgctcaacgcgtccgtcgcagccggcatcacgctgtatgcagtggcc
cgcgcccgtcgggaagccgccaacaactaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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