KEGG   Brachypodium distachyon: 100830829Help
Entry
100830829         CDS       T01717                                 

Definition
nuclear pore complex protein Nup205-like
Orthology
K14310  
nuclear pore complex protein Nup205
Organism
bdi  Brachypodium distachyon
Pathway
RNA transport
Brite
KEGG Orthology (KO) [BR:bdi00001]
 Genetic Information Processing
  Translation
   03013 RNA transport
    100830829
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
3
AA seq 1824 aa AA seqDB search
MPPPQPRELLAVIEAALLGPAPPSPGQRVELLHAVRDAAPAFRGLLSYPGPKASDRTQVE
AKEVRLPDMPPITLDDTDVQTALKLSDELNLNEIECVRLLVSANREWVLYGREPLEIYRL
AAGLWYMERRDLITSLYILLRSVVLDQGLDADLMYEIQNQMEALFSDGLQQRMITLVKEL
NREEPSGIGRPSSERYVLDFRGALVERRAIVSRERLSLSHCLALSALVKLMGPKEIKDAF
AILKDCAAEVNENTSVELQITYGVLFSLVITFVSDALSTSHEKASLPSSDSSFRHEFHEL
VTRTCNNTTVEGFVGVVRLAWTVLLMLTQDRSSARDSIINASSTLMTDIWSCMDIICRQN
AFEFLRERVIQTAAYQNDDDDIVYMYTGYAHKLMMCFLSHPTSKDKIKEIKEKAMNALSP
YVQARDHREDSSISGEQTGQPVNQPFVSLLELVGEIYQKEPELVHGNEELWTFVIYAGED
HTNTQTLVAFLGLLSTLASNEVGAAKVYELLQGKIYRSVGWNTLFDCLSIYEEKFKKSIQ
SSASMLPDFPEGDAQALVAYLAVLRKVVENGNPAERRKWFPDIEPLFKLLSYENVPPYLK
GALRNAITAFIKVSPLLKDAIWSYLEQYDLPVVTVPPGQHMATQVYDMRFELNEVEARRE
SYPSTISFLNLVNALIAEERNISDKGRRFMGIFKFVYEDVFGPFPQRAYADPREKWELAL
ACLEHFRMVLRMYDIKDDDIYAAFNTSGPSTSHASIERQLPVLELVKDFMCGKVAFRNIM
NIVLVGVDTLINERATQTYGILLEKTVHISLEIFILVMERDLVLADVYRPVYQPLDVVLS
QNHRQIVALLEFVRYDYLPQIQQCSIKIMGILSSRIVGLVQLLLKEDAAKSVIEDYAACL
EFRFDDFQVIENTKDDVGVLILQLLIDNISRPAPNMTHLLLKFDVNGPIERTVLKPKSHY
SCLKIILDNLEKVAKTDINALLHEFSFQHVGTIAVSPLPKRNNNQALRISMLHERAWLLK
MLALALHVSDISSSVYREACLAILSDTFGHCAETMKSATIFQSPGTPVYTSNGPMHRNKV
LDLLEVVQFRCPDTSMKYPQLLSNLNVESKIEEILRNSATSEFGGVYYFSERGDRLIDLD
AFHQKLLQMSQELNPQLSESEKGELKESFHHILKWAWKYNKNLEEQAAQLHMLTSWSQIV
EVAVSRRMSLLDDRSQLLFELLDASLGATSSPDCSVKMSYILTNVALTCMAKLRDERFIC
PTGADSDAVTCLDIISAKQLSNAACNSLLFKLIMAILRSESSEHLRRRQYALLLSYFQYC
GSVLDSDVPPSVIRFLLLEEQEGDDDELTLQKVLKEQSELARSNFAIIRKEAQAVIDLVT
KDAIHGSEAGKAISFYVLDSLISIDHDKFFLNQLQSRGILRSCLSDVSNYLSKDMSFSSE
FSQRFCTVDSQFSLLLRISHHYGKHGSQILLSMGALQNLSSCNLIGYQKKGNSKLSSNVV
KERAGEVDKKRSLTAPVLRIVTSFTSLVDSDDFLEVKNKVVREIVDFAKHHQFIFNSILR
ENISGANAFTLEQLNMAVSILSKVWAYEEDDECSYVQDLFSLMHSLFSLDFGSLNVIQSP
NMIENQKSELVLFGLCFGLLSYLYFLATKKNMRFEISYGDNSERGQQQPTLQMVSDLLNS
VTLALERVGEEKYLLLNKVRDLNELSRKEVDEIIKVCMKQDCISPNDNIRKRRYIAMIDL
CCMAGNRDQLITLLLQVGECAITILLVHFHDESCAKDMSSFSDELLPILERLEHLKEDKV
GRNLKLFHRSVTTLKELAVRSMSL
NT seq 5475 nt NT seq  +upstreamnt  +downstreamnt
atgccgccgccacagccgcgcgagcttctagccgtaatcgaggcggcgcttctcggcccc
gcgccgccatccccggggcagcgcgtggagctcctccacgccgtccgcgatgccgccccc
gcattccgcgggcttctctcttacccggggccgaaggcgtccgatcgaactcaggtggag
gccaaggaggttcggctcccggacatgccaccaatcactcttgatgacaccgacgtgcag
actgcccttaagttgagtgacgaactcaaccttaatgagattgagtgtgttcgtttgctc
gtttctgccaacagagagtgggttctatatggtcgagagccactggaaatatataggctt
gcggctggtctttggtacatggagaggagagatcttataacttctctgtacattttgtta
cggtcggttgtactcgaccaagggcttgatgctgatctgatgtacgaaattcaaaatcaa
atggaggctctatttagtgatggtctccagcagcggatgattacccttgtaaaggagctt
aaccgagaagaaccatctggcattggccgaccaagctctgagcgttatgtgcttgatttc
agaggagctcttgttgaaaggcgtgccattgtctcgagagagagactaagcttgagccac
tgccttgctctttctgcactcgtcaaactaatgggtcccaaggagattaaggatgcattt
gcaatattgaaagactgtgcagctgaagtaaatgaaaatactagtgtggagcttcagatc
acatatggcgttctgttctctcttgtaataacttttgtttctgatgcgctaagtacttcc
catgagaaggcatctttgccatcgtctgattcctcattcagacatgaatttcatgagcta
gtgacgaggacatgtaacaataccaccgttgaaggatttgttggtgttgtgcggcttgca
tggactgttcttttgatgctaacacaagatcgaagtagcgcaagagactcaatcattaat
gcttcctccacattgatgacagatatttggtcatgtatggacattatctgtcgtcagaat
gcttttgagtttttacgggagcgagttatacaaacagctgcctaccagaatgacgatgat
gacattgtttacatgtatactggatatgcacacaagttgatgatgtgttttctctcccat
ccaacttctaaagacaagataaaggaaatcaaggaaaaagcaatgaatgctctcagtcca
tatgtgcaagcacgagatcatagagaagattctagcataagtggggaacagactggtcag
cctgttaaccagccttttgtatctttactggaactagttggagagatctatcagaaagag
cctgagctagtgcatggaaacgaggaactgtggacttttgtcatatatgcaggtgaagat
cacaccaatacgcaaactcttgtggccttccttggacttcttagtactctggcttccaat
gaagttggtgctgccaaagtctatgaattgctccagggaaaaatttaccgctcagttggg
tggaacactttgtttgattgcttatcaatttatgaagagaagttcaagaaatccattcaa
tcttccgcaagcatgttgcctgattttccagaaggggacgcacaggcgcttgttgcgtat
ttggctgtccttcggaaggtggttgaaaatggaaatccggctgaaagaaggaaatggttc
cctgacattgagcctttgtttaagcttctcagctatgaaaatgtgcccccatatttgaag
ggggctttgcgaaatgcaatcactgcattcatcaaagtttcacccctattgaaagatgca
atttggagttatcttgaacaatatgaccttccggtggttacagttccacctggccagcac
atggcaacacaggtctatgacatgaggtttgagttgaatgaagttgaagcaaggagggaa
agttatccgtcaaccatatcatttcttaacttggtcaatgctctcattgcagaagaacga
aacataagtgacaaagggcggaggttcatgggtatctttaagtttgtatatgaggatgtc
tttgggccttttccccagagagcctacgctgatccgcgggaaaagtgggaattggcactt
gcctgcctggagcacttccgcatggttttgcgcatgtacgacataaaggatgatgatatt
tatgctgcttttaacacatctggaccttcaacatcacatgcttcaatcgagagacagctc
ccggtgctagaactggtcaaagatttcatgtgtgggaaggttgctttccgtaatattatg
aacatcgtattagtgggtgttgacactcttattaatgagcgagcaacccaaacttatggg
attcttctggagaaaactgtccacatttctcttgaaatatttattcttgtaatggagaga
gacttggttcttgctgatgtctaccgtccagtctaccagcccttggacgttgtattatct
caaaatcatagacagattgttgctttgctggagtttgtacgatatgactaccttcctcaa
attcaacaatgttcaataaaaattatgggcatcctgagttctagaatagttgggcttgtc
cagttgctcttgaaggaagatgcagctaaatctgtaattgaggattacgctgcttgcttg
gagttccggtttgatgatttccaggtcatagagaacacgaaagatgacgttggtgttcta
atattgcagctacttattgacaacatttctcgcccagccccaaatatgactcatctactc
ttaaaatttgatgtcaatgggcccatagaacgaacagttctgaaaccaaaatcccactac
agttgtttaaagataatacttgacaaccttgaaaaggtggcgaagacagatataaacgcc
ttacttcatgagttcagttttcagcatgttggaactattgctgtttcaccactccccaaa
aggaacaacaatcaagctcttcgcatcagcatgctacatgagagggcttggttgcttaag
atgctagcattggcactacatgtatccgacatatcatcatctgtgtatcgggaagcttgt
ctggctattcttagtgatacttttggtcactgtgctgagaccatgaagagtgcaaccata
tttcaatctcctggcactccggtttacactagcaatggaccaatgcatagaaataaggtt
ttggacttgcttgaagttgtacagttcagatgtccagacacttcgatgaaataccctcag
ttgctttcaaatctgaatgttgaatcgaagattgaggagatcctaaggaattccgcaacg
tctgaatttggtggtgtatattatttttcggagagaggtgatcgactgattgatctggat
gccttccatcaaaaacttctccagatgtcacaagagttgaacccgcagttgagtgagtct
gaaaaaggcgagttaaaagaatcattccatcatattctgaaatgggcctggaaatataac
aaaaatctcgaagaacaggcagcccagcttcacatgttgactagctggtctcaaattgtt
gaagtagctgtttctaggaggatgtcattacttgatgatcgttctcagttattgtttgag
ctgcttgatgcttcattgggtgccacgtcatctccagactgttcagtgaaaatgtcgtat
attttgaccaatgtagcattgacctgtatggctaaattgcgggatgaaagattcatatgc
ccaactggtgcagattctgatgcagttacttgccttgacattatttcggcaaaacagtta
tcaaatgcagcctgtaactcgttattgtttaagctcattatggcaatattgagaagtgaa
tcgtctgaacatttgagaagacgccaatatgcattactattgagttatttccagtattgt
ggtagtgttcttgactctgatgttcctccatcagttattcgcttcttgctacttgaagaa
caggagggagatgatgatgaactcactcttcaaaaggttctgaaggaacagagtgaatta
gcgcgttccaactttgccatcataaggaaggaagctcaagcggtcatcgatttggttacc
aaggatgctattcatgggagcgaagctgggaaagcaatttcattctatgttcttgattca
ttgataagtattgaccatgacaagtttttcttaaaccagcttcaaagtcgtggaattctt
agatcatgtctaagtgatgttagcaactatttgtcaaaggacatgtcattctcatcagag
ttttcacagcggttctgcactgttgattctcagttttcattacttctgagaatcagtcac
cattatggtaaacacggctctcagattttgttgtccatgggtgctttacaaaacctttca
tcgtgcaacctcataggttatcagaaaaagggaaattcaaaactaagctccaacgttgtg
aaggaacgagctggggaagttgataagaagaggtcacttactgcaccagtactgcggata
gtcacatctttcacatcacttgtggactcggatgattttttagaggtgaagaacaaagtt
gtacgtgagatagtggattttgcaaagcatcatcagttcatttttaatagcattttgaga
gagaatatatctggagcaaatgccttcaccttggagcagcttaatatggcggtttctatt
ctcagcaaggtatgggcatatgaggaagacgatgaatgcagctatgtccaagatctattt
tccctgatgcattctctttttagtcttgattttgggtctctgaatgtcattcagtcacca
aacatgattgagaatcagaagtcagaactggtattgttcggtctctgctttggcctgctc
tcttacctatattttctggctacaaagaagaacatgcgcttcgagatttcatatggtgat
aacagcgaacgcggtcaacagcaaccaacactgcaaatggtttcagatcttttgaactct
gtaacacttgctctggagagagtaggcgaagaaaaatacttgttgttaaataaggttcgt
gacttgaatgagttatctaggaaggaggtcgacgagataataaaagtatgcatgaagcaa
gattgcatctcgcccaacgataacatccgtaaaaggaggtacattgcaatgatagatttg
tgttgcatggctggcaaccgagaccagcttattacccttctactccaagtcggcgaatgt
gccatcactattctcctcgttcattttcacgacgagtcttgtgcaaaagacatgtcttca
ttttctgatgaactactccctatactggagaggctggagcatttaaaagaggacaaagtt
gggcgtaatctcaagttgttccacagatctgtgaccactctgaaagagttggcagtcaga
agcatgtccttatga

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