KEGG   Brachypodium distachyon (stiff brome): 100836060
Entry
100836060         CDS       T01717                                 
Name
(RefSeq) probable protein transport Sec1b
  KO
K15292  syntaxin-binding protein 1
Organism
bdi  Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bdi04131]
    100836060
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bdi04147]
    100836060
Membrane trafficking [BR:bdi04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    100836060
 SNARE
  SNARE associated proteins
   Syntaxin-binding proteins
    100836060
Exosome [BR:bdi04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100836060
SSDB
Motif
Pfam: Sec1 DUF3982
Other DBs
NCBI-GeneID: 100836060
NCBI-ProteinID: XP_003557237
UniProt: I1H1U4
Position
1:50146316..50153583
AA seq 652 aa
MSMSGSDFGTVNEDPRIFRNICRDRILKDLLKPDKDKETKSSWKVLIMDKFTVRIMGYAC
KMAEITDAGISLVEDLFKRREPMPSMDAIYFLQPLKENVIMLLSDMSGRCPLYRKAYIFF
SSPIPKDLVTYIKNDSSVIPRIGALREMNLEFFTIDMQGFVTDHDTALIDLYASEHSSKK
FNDTITTMATRIATTFASLKEYPTVRYRAPKSADPSATTKFDMVPKWLATAVWEIVSKYK
STIPEFPQKETCELLVVDRPIDQIAPVIHEWTYDAMCHDLLEMDGSKYIYEVSKAGEDPE
KKEAVLEDHDPLWIELRHIHIADASERLYEKMNNFVTKNKAAQLQSRDGGEISTTDLQKI
VQALPQYSEQVEKLTLHIEIAGKINRFIREYALRDLGQVEQDLVFGDAGAKEVISLLRSK
QNMSPENKLRLLIIYAIVYPEKFEGDKGDKLMQLAKLPSDDMKVINSLRYLVGSDAKKAR
AGGFSLKFDAQKKKNAARTERQDGEETWALSRFFPLIEELIEKLSKGELPLNEYPSLSGA
STTAQGTTESASAPKPAQNPQPMSRRSRRTPQWAKSKNSDDSQSSDSSALRHASGDFKRL
GNRIFVFMVGGATRSELRTAHKLTMKLRREIVLGSSSIDDPPEFISKLKSLT
NT seq 1959 nt   +upstreamnt  +downstreamnt
atgtcgatgtcggggtcggacttcggcaccgtgaacgaggaccctaggatcttccgcaac
atctgccgagaccggatactcaaggatttgctcaagccggacaaggacaaggagaccaag
agctcatggaaggttcttatcatggataaatttaccgtgaggatcatgggctatgcttgc
aagatggcagaaattactgatgcagggatttcgttggtagaagatcttttcaaacgaagg
gaaccaatgccttcaatggatgcaatctactttctacagccactgaaagaaaatgtcata
atgcttctatccgacatgtctgggagatgtccgctgtataggaaggcatacatcttcttt
agttcaccaattcctaaggatctggtaacttacataaaaaatgacagcagtgtgatacca
cgcatcggtgcactaagagagatgaatttggagttcttcactattgacatgcagggcttt
gtaactgaccatgatacggcactgattgatttatatgcaagtgagcacagctcaaaaaag
tttaacgacacgataaccactatggctactcgcattgctaccacattcgcttcgttgaag
gaatatcctactgtgcggtatcgtgcccccaaaagtgcagacccttcagcaacaacaaaa
tttgacatggttccaaaatggctagctactgctgtttgggaaattgtgtcgaaatataag
tcaacaattcctgaatttccccagaaggagacatgtgaactgctcgttgtggacaggcct
atagatcagatagcacctgttattcatgaatggacctatgatgcgatgtgccatgatcta
cttgaaatggatggcagcaaatatatatatgaggtgtcaaaagcgggagaagatcctgaa
aagaaggaggctgtattggaggatcatgatcctctctggatagagcttcgccatattcac
atagctgatgctagtgagaggttgtatgagaagatgaataactttgttacaaagaataaa
gcagcgcaacttcaatcaagagatggtggtgaaatctcaacgacggacctgcaaaagatt
gttcaagctttgccacaatacagtgaacaagttgagaaattgactctccatatagagatt
gctggaaaaattaacaggttcatcagggagtatgcactccgtgaccttgggcaggtggag
caggatctggtttttggagatgcaggagcaaaggaggtgatcagtctgctcaggtcgaag
cagaatatgagtccagaaaacaaattgagattgctgattatatatgcaattgtatatcct
gagaagtttgaaggtgacaaaggggacaagttgatgcagctagcgaaactgccatcggat
gacatgaaggtaataaacagcttaagatacttggttggttcagatgcaaaaaaggcacga
gctggtggtttttctctgaaatttgatgcccaaaagaagaaaaatgctgccagaacagaa
cggcaggatggtgaggaaacatgggcattgtcacgttttttcccacttatagaggagctg
attgagaaactgagcaaaggtgaattacctctaaacgaatatccgtctttaagtggagca
agcactactgctcaagggaccacagaaagtgcatcggcaccaaaaccagcacaaaatcca
cagccaatgtctaggagatcacggcgcacaccacaatgggccaagtctaaaaactcagat
gatagtcaatcaagcgattcttcagcattaagacacgcatcaggtgacttcaaaaggcta
ggcaacagaatttttgttttcatggttggtggagcaactagatctgaactacggacagcg
cacaagctgacgatgaagctgaggagagaaatcgtcctcgggtcttctagcattgacgat
cctccagagtttatttcgaagctgaagtcgctaacctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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