KEGG   Brachypodium distachyon (stiff brome): 100837329
Entry
100837329         CDS       T01717                                 
Name
(RefSeq) WD repeat-containing protein PCN
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    100837329
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bdi03009]
    100837329
Ribosome biogenesis [BR:bdi03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    100837329
SSDB
Motif
Pfam: WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 100837329
NCBI-ProteinID: XP_003560086
UniProt: I1GNL4
Position
1:complement(6822624..6829174)
AA seq 815 aa
MEKLRVHRCGGGAVAWTPSPIVALATSPCASQVAAARGDGSLELWLVSPGSVGWHHQLTI
HGSAQSMVTALVWVPSGAGGRLLSSSIDGSVAEWDLFHLKQKNVLDSVGVPVWQMAMEPT
DDPLNSENKSSGCASNGRANHNGRTDSDLSYVDDGDSFDDEDDSAKTSSPYRVNEFQRLA
LACDDGSVRLYNVPESGSLTYYRSLPRVSGRILSVTWSNNAKFIFSGSSDGLIRCWDSTS
FHEKYRMTAGLGGAGSGSEFCIWSLLFLRCGTLVSGDSSGTVQFWDSRHGTLLQAHSYHK
GDVNALATVPSQNRIFSAGSDGQVILYKASKDEFGADNEKVAKDQMHKWAYVGYVRSHSH
DVRALTMAVPICKEDAPPEEKVVKKIRQREKPVDSYHKWAHLGVPMLISGGDDTKLFAYS
AREFTQFAPHNFCPAPQRPLINLARDGTVNGDSVMLVQSANWLDVLLVSVQNNLIPSTSS
RGDATIRQVVRLKSKGSRKIVSSAISTNGMLLAYSDCVKPCLFALRHKGGKKYALDKVEL
PKGIPSSQSMMFTADSSNLVLACCDGKIYVVDIATKEISNVFHPTRKMDGEKPSSKEPPV
TKMFLSVDGQWVAAANCFGDVYIFNLEVQRQHWFIPRMNDGSVTSGGFCPKNNSLVITTS
KNEVYIFDVEAKQLGEWSKRYTHHLPRRFQEFPGEVIGLSFPPLSSSSVVVYSARAMCVI
DFGLPVVQDVQLSNGSVVPAEKINQQKGTKSKIKRKDRDEEMKLEKRNNFDFFAFKDPVL
FVGHLLDSSALIVEKRWMDVVEGFGPPVHRHIYGA
NT seq 2448 nt   +upstreamnt  +downstreamnt
atggagaagctccgcgtccaccgctgcggcggcggcgcggtcgcgtggacgccctccccc
atcgtcgcgctcgctacctctccctgcgcctcccaggtcgcggccgcgcgaggcgacggt
tccctcgagctctggctcgtctcccccggctccgtcgggtggcaccaccagctcactata
catgggagcgcgcagtcaatggtcacggcgcttgtgtgggtgccgagcggcgcagggggg
cggttgctctcttccagcatcgatggttcagttgcagaatgggatctcttccaccttaag
caaaagaatgtcctagattctgttggtgtaccagtctggcagatggccatggaacctaca
gatgatcctttgaattctgaaaataaaagctcaggatgtgcttccaatggccgtgcaaat
cataatggccgcactgactctgacttaagttatgtcgatgatggtgatagctttgatgat
gaagatgattctgccaagacaagctctccatatcgtgtgaatgaattccagcgtttggcc
ctggcatgtgatgatggttctgtacgcttgtataatgtgcctgaatctgggtcattaact
tactatagatctcttccaagagtaagcggacgcattttgagtgtgacatggagtaataat
gccaagttcatattttctggaagcagtgatgggttaattagatgctgggattcaacatct
ttccatgaaaagtatcgcatgactgctggattaggaggtgctggtagtgggagtgaattt
tgcatatggtcattactgtttctgaggtgtggaacccttgttagcggagatagttctggg
acagttcagttttgggatagccgccatggaactcttttgcaagctcactcttatcataaa
ggcgacgtcaatgcactagcaactgtgcctagtcagaaccggatattttctgcaggatct
gatgggcaggtaattttgtacaaggcgtcgaaagatgagtttggtgctgataatgagaag
gtggccaaagatcaaatgcacaagtgggcctatgtaggatatgtgagatcccattctcat
gatgttagggcattgaccatggcggtaccaatttgcaaagaagatgctccaccagaggaa
aaagtagtgaagaagatacgccagcgcgaaaaacctgttgacagttaccacaaatgggca
catctgggtgtgcctatgctgatttctggtggtgatgacaccaagctgtttgcttattct
gcgagggagtttactcaatttgcccctcataatttctgccctgcacctcaacggccattg
ataaatctggcaagagatggcacagttaatggagattctgtgatgcttgtccagtctgcc
aattggttggatgttttacttgtgtcagttcagaacaatctgattcctagtacgtcatcc
agaggagatgctacaatacgacaagttgttcgtctgaaaagcaaggggtcccggaaaatt
gtttcaagtgccatctctaccaatggaatgctattggcttattctgattgtgtgaagccc
tgcctttttgcgttgaggcataagggcggaaaaaagtacgctctagacaaagtagagttg
ccaaaaggaatacctagttctcagagtatgatgtttaccgctgactcatccaatctggta
ctagcttgttgtgatggaaaaatatatgttgtggatattgcgacaaaagaaatttcaaat
gtatttcacccgactagaaagatggatggagaaaaaccttcttccaaagaaccaccggtc
acaaaaatgttcctgagcgtggatggtcagtgggtggctgcagctaactgctttggggat
gtttacatatttaaccttgaagtgcagaggcagcactggttcataccgagaatgaatgat
ggttcagttacatctggtggcttttgtcccaaaaataattcccttgtcataactacatct
aaaaacgaggtgtacatatttgacgtagaagcaaagcaattaggcgaatggtcaaagcgc
tatacacatcatttgcccagaagattccaagaatttcctggagaggtcattggtctctca
tttcctccactaagttcatcttcagttgtggtatacagtgcaagggcaatgtgtgtcatt
gattttggattgccagttgttcaggatgttcaactgtcaaatggttcagttgtaccagca
gaaaagataaaccaacaaaagggtacaaaatccaagattaagcggaaggatcgtgacgaa
gagatgaaactagagaaaaggaataactttgacttctttgcgttcaaagatccagtgctg
tttgttggtcacctattggacagttcagctttaatagttgagaagcgatggatggatgtt
gttgaaggttttggcccaccggttcatagacacatatatggggcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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