KEGG   Brachypodium distachyon (stiff brome): 100839764
Entry
100839764         CDS       T01717                                 
Name
(RefSeq) uncharacterized protein LOC100839764
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
bdi  Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bdi03016]
    100839764
Enzymes [BR:bdi01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     100839764
Transfer RNA biogenesis [BR:bdi03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    100839764
 Prokaryotic type
    100839764
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 100839764
NCBI-ProteinID: XP_003578802
UniProt: I1ITQ5
Position
4:44865609..44870972
AA seq 386 aa
MSAASSDSAAASKRPFDPSLADPSLPSKLQRSSHPDISPAEKPEGVGAAGPESEAMAAAR
VPRGQRYLVAVEYAGTRFCGSQQQPDQRTVVGVLEEAFHKFVGQPVSVFCSSRTDAGVHA
LSNVCHVDVERISKRKPGEVLPPHDPGVVKRAVNHFLQKNEGDIMVTDVRCVPPDFHARY
KALERTYHYRILSGPERQSVFEKNSAWHIPEDLNIQAMKKACDLLVGHHDFSSFRATGCQ
AKSPVRTLDELTVTEVFPFMFFPSSVERSEMESPDGSLVYSRTSLMRASAEGSDAPSTAS
GKSVSENGQEFGKRLRHRCFVVTARARSFLYHQVRLMVGLLKSVGIGDLTTADVERILDA
KAVTAAPPMAPASGLYLANVKYDLSI
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgagcgccgccagctctgactccgccgccgcctccaagcggccgttcgacccctccctt
gccgacccctctctgccttccaagctccagcgttcctcccatccagacatctcgccggcg
gagaagccggagggcgtcggagcggcggggcccgaaagcgaggcgatggcagccgcccgg
gtccctcgggggcagcggtacctggtggcagtggaatacgcaggcacccgcttctgcggc
tcgcaacagcagcccgaccagcgcaccgtcgttggcgtcctcgaggaagcatttcacaaa
ttcgttggacagccagtctcagtcttctgttctagtcgaacggatgcaggggttcatgct
ttgtcaaatgtttgtcatgttgatgtggagcggataagtaaaaggaagcctggtgaagtg
ttgccacctcatgaccctggagttgtgaaacgtgcagtgaaccactttctgcagaagaat
gaaggtgacataatggtgactgatgttcgttgtgtcccaccagacttccatgctagatac
aaagccctagagcgcacgtaccactatcgtatactttctggacctgagcgacagtcagtc
tttgaaaaaaactcagcttggcacatacctgaggatctaaatatacaggctatgaagaaa
gcatgcgatttacttgtcgggcatcatgatttcagttcattccgagcaactggatgtcag
gcaaaatctccagtgagaactttggatgagctcactgttacagaagtatttcctttcatg
ttttttccttcaagcgtagagcgatcagagatggaatcaccagatgggtctcttgtttat
tcgagaacatcactcatgagagcttctgcagaaggatctgatgctcctagtactgctagt
gggaaatcagtatctgagaatggacaagagtttggaaagagattaaggcaccgctgcttt
gttgttactgcaagggcacggtcatttctctaccaccaggtacgattgatggtcggcctt
ctgaaatctgttgggattggagatctaacaactgcagatgttgagagaattttggatgcg
aaggcagtgactgctgcacctcctatggcacctgcttccggtctttaccttgcaaacgtg
aaatatgacctgagtatttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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