KEGG   Brachypodium distachyon (stiff brome): 100841227
Entry
100841227         CDS       T01717                                 
Name
(RefSeq) katanin p60 ATPase-containing subunit A1
  KO
K07767  katanin p60 ATPase-containing subunit A1 [EC:5.6.1.1]
Organism
bdi  Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:bdi04812]
    100841227
Enzymes [BR:bdi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.1  microtubule-severing ATPase
     100841227
Cytoskeleton proteins [BR:bdi04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     100841227
SSDB
Motif
Pfam: AAA KATNA1_MIT AAA_lid_3 Vps4_C RuvB_N AAA_5 TIP49 AAA_22 AAA_33 Mg_chelatase IstB_IS21 AAA_14 AAA_16 AAA_28 AAA_18 AAA_17 RNA_helicase PhoH AAA_7 AAA_2 TsaE Parvo_NS1 nSTAND3 AAA_24
Other DBs
NCBI-GeneID: 100841227
NCBI-ProteinID: XP_003569573
UniProt: I1HQF6
Position
2:46907476..46913054
AA seq 518 aa
MATPLAGLQDHLKHARDYALEGLYDTSIIFFEGAIAQINKYLSTLDDALIRTKWLNCKKA
ICEEVEIVKQLDAQLKSFKEAPGTTRSSSPPIRSNKSFLFQPLDEYPTSSPPTFDDPDVW
APPRDSSNRRSTRGQSSARKSSQDGAWARGSSKTGTPSRGAKHNGSKASSAVRSATASST
GGRKGKSSSSKPDSASSDAEEGKSKKVQYEGPDGDLAAMLERDVLDSTPGVRWDDVAGLS
EAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSS
ATLASKWRGESERMVRCLFELARAYAPSTIFIDEIDSLCTSRGASGEHESSRRVKSELLV
QIDGVNNSSTNEDGQPKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPSFESRKSLININ
LRTVEVATDVDIDEVARRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEIKNMSKDDIS
KDPVAMCDFEEALVKVQKSVSPSDIERHEKWMAEFGSA
NT seq 1557 nt   +upstreamnt  +downstreamnt
atggcgacccccctcgccgggctgcaggaccacctcaagcacgcccgcgactacgcgctc
gagggcctctacgacacctccatcatcttcttcgaaggcgccatcgcccagatcaacaag
tatctaagtactttggatgatgccctgattcgcacaaaatggttgaactgtaagaaagct
atctgtgaagaggtagaaattgtgaagcagcttgatgcccaattgaagtcttttaaagaa
gctcctgggacaacgcggtcctcgtctccgcctattcgctctaataaatcatttcttttc
caaccattggacgagtacccaacatcatcgccaccaacctttgatgaccctgatgtttgg
gcgcctccaagagactcatcaaatcgaaggtcaacaagaggccaatctagtgcgagaaaa
tcctcccaggatggagcttgggcacgtggttcatcaaagactggaacacctagccgtggt
gcaaaacataatgggagcaaagcaagctctgcagtaagatcagcaactgcttctagcact
ggtgggaggaaaggaaaatcaagttcaagcaagcctgattcagcaagtagcgacgctgaa
gaaggcaagtccaagaaggtacagtatgaagggccagatggggacttagctgccatgctt
gaaagagatgttctagattctaccccaggagtgagatgggatgatgttgcagggcttagt
gaggccaaaagactcctcgaggaagcggttgtgcttcctctctggatgcctgaatacttt
cagggtattcgtcgaccttggaaaggggtacttatgtttggcccaccaggtactggaaag
acccttttagccaaggcagtagctacagaatgtggcacaacattcttcaatgtttcttct
gcaacattggcttctaaatggcggggggagagtgagcgcatggtccgttgtttatttgaa
cttgcaagggcctacgctccaagcacaatcttcattgatgaaatcgactccctatgcaca
tctcgtggagcttctggcgagcatgaatcatcgaggagggtaaagtctgaacttctagtg
caaatagatggtgttaacaatagctctaccaatgaagatggccaaccaaaaatagttatg
gttctggcagctaccaactttccatgggatattgatgaagcgctgaggcggaggctggaa
aagcgtatttacattccacttccaagtttcgaaagcagaaagtcactcatcaacattaat
cttagaactgttgaggttgctactgatgttgacattgatgaagttgcacggagaacagag
ggttatagtggggatgaccttacaaatgtttgccgtgatgcttcgatgaatggcatgagg
cgaaaaatcgcaggcaagactcgtgatgagatcaagaacatgtcaaaggatgatatctca
aaggacccagttgccatgtgcgactttgaggaagctttggtcaaggtccagaagagtgtc
tcgccctctgatatcgaacggcatgagaagtggatggctgagtttggatctgcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (24)   
   Pfam (24)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system