KEGG   Brachypodium distachyon (stiff brome): 100841278
Entry
100841278         CDS       T01717                                 
Name
(RefSeq) BRCT domain-containing protein At4g02110
  KO
K10728  topoisomerase (DNA) II binding protein 1
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    100841278
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bdi03032]
    100841278
   03400 DNA repair and recombination proteins [BR:bdi03400]
    100841278
DNA replication proteins [BR:bdi03032]
 Eukaryotic type
  DNA Replication Initiation Factors
   Other initiation factors
    100841278
DNA repair and recombination proteins [BR:bdi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     100841278
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 RTT107_BRCT_5 PHD PHD_Oberon PHD_2
Other DBs
NCBI-GeneID: 100841278
NCBI-ProteinID: XP_003559756
UniProt: A0A0Q3RNF6
Position
1:13557120..13563137
AA seq 1377 aa
MHGSDDDVDYGDDARLFAGVRFALVGFDSVSESQYRSEMARRGGADAGGHGAAGCTHVVV
CGLVYDDPVCAAAREGGKKVVTELWVDDSLDMGALANADRVLYKPQRDLNGIPGSQSLNI
CLTGYQKNRREDIMKMVTLMGANFSKSLVAGTSTHLICYKFEGEKYELAKRVDIKLVNHR
WLEDCLEAWEILPIDNYTKSGWQQEMMETQVEDSEDEAEDVGRGLSHSRVIPRSVPITKI
RTATHVDPDRRTPIRGPTVSTGNAQVGAGGHMDTPKQVIEAEDISKMSIDIRADVQSTHN
TNGVTSSADPEAHDSVHPPVNPSNNEKAPGGHIIGDEAKYGDKRAVDTTASTLSTLNTSG
ATVQADHLVHQPIVTPSTESPLKKTLHSSHTCEKVDQKDDEPVADLAAKVVQSNVQGNVT
LCKVNLTSAGNSAPKNTPVLSYSSRRSRKSVSPGANLNSVHQTASPQSSKTSTLNDELNI
SPSVKSNHKISKHTDAKSLQDKACALAQRKSRFSSVGPITPNGSTDSATGTADSLFSSKE
IASEAAAVSDLVKKSTGSQPVKVDSNINSNATVNLVERQKSGSPKKKLSYRRTSLKLTRS
SEVEKLPESFANEKNLESLAKAKKQPRHEAAVEKGCAISPSVDSELGNTSSSLTLGNLGI
EMGETPQVNNIEVVSPNLQHDKVVSCATTQSGAHKASTSGVKKAGAKRSRNAGNETHTVS
VDGESEAAASKYKHDEVISHEDVEREAEKDCTSPNDAERTTLFPEKSSSSRARNAAANSS
LNENSEMNDVIAASNMKNPQGNINKNHKQLSSGASAHEYKESSSKKVPNATETNDVANVS
RSVKIKMTEAPSADKTKAGSLISSLSGVVPQAYTERLSSNGSANKHEICNPDKGPGKRMR
NAVAKRKVSAAQQHRSGSEPCKTGGVFSSDAEVITSKTAADSSGNANKITVDQDVQNANK
DAMTNADGSFCKDSSKVASKDLQKSKLRSSKRKFLAVVEDGSTNHNKENIQVNANITPKA
KCGNSTKAVQNSKDVLDDPSIREGYDCTTLTMLEPTRFILSGHRLLRKEYRLILRRLKGR
VCRDAHHWTFEATHFIAPELRRTEKFFAAAAAGRWILKSDYLSACNEAGKFVEEEPFEWH
GDGLNNGETISLDSPRKWRQLRQRTGHGAFYGMQIIIYGECISPSLDTLKRAVRAGDGTI
LATAPPYTRFLKPGVSFAIVSAGVPRTDVWVQEFMNHKIPCINADYLVEYVCKPGHPLKK
HILFDMDDLADESLQKLQKAQRDLGAGTEEVTEGGDNTEPSCSACGSNNREGSQLLICSG
GEGNQASCGVAMHVDCWNPHHPEPVPDGEWLCPKCDEHMEPLKKAKKTSRSRVRKRS
NT seq 4134 nt   +upstreamnt  +downstreamnt
atgcacggcagcgacgacgatgtcgactacggcgacgacgcgcgcctcttcgccggggtc
cgcttcgcgctcgtcggcttcgactccgtctccgagtcccagtatcggtcggagatggca
cggcgcggcggcgcggacgccggcgggcacggcgcggcggggtgcacccacgtggtcgtc
tgcggcctcgtctacgatgatccggtgtgcgcggctgcgcgggagggcgggaagaaggtc
gtgaccgagctgtgggtggacgatagcctggatatgggagcgctggccaacgctgaccgg
gtactatataagccccagagagatttgaatggtataccaggtagtcagtcgcttaatatt
tgcctgacagggtaccaaaagaacaggcgtgaagacataatgaaaatggttactttaatg
ggagcaaacttctcaaaatctttagtagcaggcacaagcacccatctcatttgctacaaa
tttgaaggtgagaagtatgaacttgctaaaagggtggatatcaaacttgttaatcaccgg
tggttggaagattgcttggaggcttgggaaattcttccaattgataattacactaaaagt
ggttggcaacaagagatgatggaaacacaagttgaggactctgaagatgaagcagaagat
gtcgggagaggcttatcgcatagtagagtcattcccagaagcgtcccaatcacaaaaatt
agaacagcaactcatgttgatcctgatcgccgcacacccattcgtggtcctactgtctcc
actggcaatgctcaggttggtgcaggaggacacatggacactccaaaacaggttattgaa
gcagaagatataagcaaaatgtcaattgacatcagagctgacgtacaaagcactcataac
acaaatggtgtgacaagttctgctgatcctgaggcacatgattctgtccatcctcctgtt
aaccccagtaacaatgaaaaggctccaggaggtcacatcattggagatgaagccaaatat
ggtgataaaagggcagttgatactacagcaagcaccctttctactctgaacacaagtggg
gccacagttcaagctgatcatcttgtacatcaaccaattgtgacaccttctactgaaagt
cccttgaagaaaacattgcactcatcacatacgtgtgaaaaagtagatcagaaggatgat
gaacctgtagctgatcttgctgccaaagttgttcaatcaaatgtgcaaggaaatgtaacc
ttgtgtaaggttaatttaacatcagcaggtaattccgcgccaaagaataccccagtctta
agctactccagtaggcgttctcggaagtcagtctcaccaggagctaatttaaattcagtt
caccaaacagcatctccccaaagttccaagacaagtacactaaatgatgagcttaatatc
tccccatcggtgaagagcaatcataaaattagtaagcatactgatgccaaaagcctgcaa
gacaaagcatgtgcacttgctcagaggaagagcaggttttcttcagtcggtccaataacg
ccaaatggaagcacagactcagcaactggaactgcagatagtctgttctcaagcaaggaa
attgcatctgaagcagcagcagtttctgatcttgtgaaaaaatccactggatctcaacca
gtcaaagttgacagtaatataaacagtaatgctactgttaatcttgtggagaggcaaaag
tctggctcacctaaaaagaagttgagctacagaagaacttctttgaagcttacaaggtct
tctgaagtagaaaaacttcctgaaagttttgctaatgagaaaaatttggagtcactggct
aaagcaaagaaacagccacggcatgaggcagcagttgagaagggatgtgctataagccct
tctgttgattctgaacttggaaacacaagttcgagtctcacacttggaaatctgggtatt
gagatgggtgaaacaccgcaggttaacaacattgaagttgtatctccaaacttacaacat
gataaggtggtttcttgtgcaaccacgcaatcaggtgcccacaaagcatcaacttctgga
gtgaagaaggcaggtgccaagaggtctcggaatgctggcaatgagacacatacagtgtct
gtagatggtgaaagtgaggctgcagcctctaagtacaagcatgatgaagttatttcccat
gaagatgtagaacgagaagcagaaaaagattgtaccagtccgaatgatgctgaacgtaca
acattatttcctgaaaaatcctcaagcagtagagcaaggaatgcagctgccaatagctct
ttgaatgaaaacagtgagatgaatgatgtgatagcggcttccaacatgaagaatccacag
ggaaatatcaacaaaaaccataaacagctttcaagtggtgcaagtgctcatgaatataaa
gaaagctcatccaagaaggtgccaaatgccacagaaacgaatgatgttgcaaacgtgtct
cgatctgtcaaaatcaagatgactgaagcaccatccgctgataaaaccaaggcaggttct
ttgatatcaagtttaagtggggtggtccctcaagcttacactgaaaggctttcaagcaat
ggaagtgctaataagcatgaaatctgtaaccctgataaaggaccaggcaagagaatgcgc
aatgcagttgccaagaggaaggtttctgctgcccaacaacacagatctggtagtgaacct
tgcaaaactggtggtgtcttttcatctgatgctgaagttatcacatcaaagacagctgca
gacagttctggaaatgccaacaagataacagtggatcaggatgtccagaatgctaataag
gatgcgatgacgaatgcagatggatcattttgcaaagattcctcaaaagttgcatcaaaa
gatttgcaaaagtctaaactgagaagcagcaaaaggaaatttttggcagttgtagaggat
ggttctaccaaccataacaaggagaatatacaggtcaatgctaatatcacacctaaagca
aaatgtggaaatagcacaaaagcagtacaaaatagcaaagatgtgcttgatgaccccagt
attagagaaggatatgattgtacaaccttgaccatgttggaaccgacaaggtttatttta
agtggccatcgtctgctgagaaaggagtacaggttgatacttcgacgcctgaagggaaga
gtttgcagggatgcgcatcattggactttcgaagccacacattttattgcacctgagctc
cgcagaactgaaaaattcttcgcagctgctgcagctgggagatggattctcaagtctgat
tacttgagtgcttgcaatgaggctggcaaatttgtagaggaagaaccatttgagtggcac
ggtgatggccttaacaatggtgagacaataagtttggattctccaaggaaatggcgacag
ctaaggcagcgtactggccatggcgccttctatggaatgcagatcattatatatggagag
tgcatttctccatcattagacacgctgaagcgtgctgtaagggctggcgatggcaccatc
ttagcaactgccccgccttacaccaggttcctgaaacctggtgtcagttttgccatcgta
tctgcaggcgtgccaagaacagatgtgtgggtccaggagttcatgaaccacaaaattccc
tgcatcaacgcagactatctcgtggagtatgtgtgcaagcccgggcaccctctgaagaag
cacatcctctttgacatggacgatctggcagacgagtccctgcagaagctacagaaggcc
cagcgagatctcggtgccggcaccgaagaggtgaccgagggaggagacaacacagagccg
agctgttctgcttgtggatcaaacaaccgggaagggtctcagttgttgatttgcagcggt
ggtgagggaaaccaggccagttgcggggtggctatgcacgtggattgctggaacccgcac
catcctgagcctgtgcctgatggtgagtggctgtgccccaagtgtgacgagcacatggaa
cccctgaagaaggccaagaaaacttccagatcacgcgtgcgcaagcgcagttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system