KEGG   Brachypodium distachyon (stiff brome): 100843514
Entry
100843514         CDS       T01717                                 
Name
(RefSeq) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100843514
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bdi03021]
    100843514
Transcription machinery [BR:bdi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     100843514
 Prokaryotic type
  Archaeal type
    TFB
     100843514
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Cyclin_N MerR
Other DBs
NCBI-GeneID: 100843514
NCBI-ProteinID: XP_003560170
UniProt: I1GU52
Position
1:complement(21772276..21773396)
AA seq 332 aa
MYNDVANCMRYCKGCRRVTTVTVNPASGDTVCTECSLVLKERYVDESLEWRNFLNHGPAA
PADKSPSHIDDHFLTNLQLGTAVAGPATGNAETDVALPRKRGGGVPKKRGAAAAAAAAPN
RTLAEAFQAMDGMAERLGLATAVKDRAKEVLRKLEDAKAFPKGGKCRNRLALYAACLHVA
CRAEGTPLTFKELASVTGDSVTAGMKDIGRLVKHIRNHLEDQDQDAEGTQAATLEMGAVV
RAGDYLCRFGSLLGMGQEELHAAQEAVRRLEKDLDVRRNPDSIAATVIYMAIQRGGAGKS
IRDVSAATGVSEVTIREVHNKDLSPHADLLFA
NT seq 999 nt   +upstreamnt  +downstreamnt
atgtataacgacgtggcgaactgcatgcgctactgcaagggctgccgccgcgtgaccacg
gttacggtcaaccctgcctccggcgacaccgtctgcaccgagtgctcgctcgtcctgaag
gagcgttacgtcgacgagtccctcgagtggcgcaacttcctcaaccacgggccggcggca
ccagccgacaagtcccccagccacatcgacgaccacttcctcaccaaccttcagctcggc
accgctgtcgccggtccagccacaggcaacgcggaaaccgacgtggcgttaccgaggaag
agaggcggtggcgtaccaaagaagcggggcgcggcagcggcggcggcggcggccccgaat
aggacgctcgccgaggcgttccaagccatggacggcatggccgagcgacttgggctcgcg
acggccgtcaaggaccgcgccaaggaggtgctgaggaagctggaggacgccaaggcgttc
cccaagggtggcaaatgccggaaccggctggcgctctacgcggcctgcctccacgtggcg
tgccgcgccgagggcacgccgctcacgttcaaggagctggcgtccgtgacgggggacagc
gtcacggcagggatgaaggacatcggcaggctcgtcaagcacatcaggaaccacctcgag
gatcaggatcaggatgcggagggaacgcaggcagccacgctagagatgggcgccgtggtg
cgggccggcgactacctctgccgcttcggctcgctgctcgggatggggcaagaggagctg
cacgcggcgcaggaggcggtgcgaaggttggagaaggacctggacgtgaggcgcaaccct
gactccatcgcggccaccgtcatctacatggcaatacaacgcggtggcgccgggaaatcc
atccgggacgtgtctgcggccaccggcgtcagcgaggtgaccatcagggaggtgcacaac
aaggacctcagcccacacgccgacttgctgttcgcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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