KEGG   Bifidobacterium dentium JCM 1195 = DSM 20436: BBDE_0217
Entry
BBDE_0217         CDS       T04222                                 
Name
(GenBank) recombination protein RecR
  KO
K06187  recombination protein RecR
Organism
bdn  Bifidobacterium dentium JCM 1195 = DSM 20436
Pathway
bdn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bdn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BBDE_0217
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bdn03400]
    BBDE_0217
DNA repair and recombination proteins [BR:bdn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BBDE_0217
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BBDE_0217
SSDB
Motif
Pfam: Toprim_4 RecR_HhH Toprim RecR_C RecR_ZnF Toprim_2 HHH_5 HHH
Other DBs
NCBI-ProteinID: BAQ26211
Position
289080..289682
AA seq 200 aa
MALAYDGAIQRLIDAFAHLPGIGPKGAQRIAFYMLNASDEESQGLIDAITEVKEKVRFCE
ICGNVCETSPCPVCVDPRRDRSVICVVEEPKDVMSIERTREYRGLYHVLGGAINPMANVQ
PSDLNIAKLIERLKDSEVKEVILALNPNVEGEATTSFLAQLLSQTDIKVTRLASGLPVGG
DLEYADEITLGRALAGRRNV
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcattggcctatgacggcgccatccagcgcctcatcgacgcattcgcgcacctgccc
ggcatcgggccgaaaggagcgcaacgtatcgccttctacatgcttaacgcctccgatgag
gagtcgcagggcctgattgacgccatcaccgaagtcaaggagaaggtgcgattctgcgaa
atctgcggcaatgtgtgcgagaccagcccctgcccggtgtgtgtggaccctcgtcgcgat
cgtagcgtgatttgcgtggtggaggagccgaaggacgtgatgagcatcgagcgcacgcgc
gaataccgtggcctgtaccatgtgctcggcggggcgatcaatccgatggcgaacgtgcag
ccgagcgatctgaacatcgccaaactcatcgagcggttgaaggacagcgaagtcaaggag
gtgattctcgcactcaatccgaacgtggaaggcgaggccaccaccagcttcctcgcacag
ctgctctcgcagaccgacatcaaggtgacgcgtctggccagcggcctgccggtgggcggc
gacctcgagtatgccgacgaaatcaccttggggcgtgccctcgccggtcgccgcaatgtc
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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