KEGG   Phocaeicola dorei HS1_L_1_B_010: EL88_03670
Entry
EL88_03670        CDS       T03262                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
bdo  Phocaeicola dorei HS1_L_1_B_010
Pathway
bdo02024  Quorum sensing
bdo03060  Protein export
bdo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bdo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    EL88_03670
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    EL88_03670
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    EL88_03670
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bdo02044]
    EL88_03670
Enzymes [BR:bdo01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     EL88_03670
Secretion system [BR:bdo02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   EL88_03670
  Eukaryotic Sec-SRP protein
   EL88_03670
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin cobW AAA_22 CbiA AAA_33 nSTAND3 APS_kinase ATPase AAA_31 AAA_24 AAA_18 AAA_17 AAA_16 MMR_HSR1 TsaE 6PF2K ArsA_ATPase AAA_14 AAA_30 DO-GTPase1 NACHT KTI12 KAP_NTPase ParBc ATP_bind_1 AAA_5
Other DBs
NCBI-ProteinID: AII62319
Position
855038..856360
AA seq 440 aa
MFDNLSERLERSFKILKGEGKITEINVAETLKDVRKALLDADVNYKVAKGFTDTVKEKAL
GQNVLTAVKPSQLMVKIVHDELTALMGGETAELVLEGRPAVILMSGLQGSGKTTFSGKLA
RMLKTKKNRKPLLVACDVYRPAAIEQLRVLGEQIEVPVYSELDSKNPVQIALNAIHEAKA
KGYDLVIVDTAGRLAIDEQMMNEIEAIKKAINPDETLFVVDSMTGQDAVNTAREFNERLD
FNGVVLTKLDGDTRGGAALSIRTVVNKPIKFVGTGEKLDAIDQFHPARMADRILGMGDIV
SLVERAQEQYDEEEAKRLQKKIAKNQFDFNDFLSQIHQIKKMGNLKELASMIPGVGKAIK
DIDIDDNAFKSIEAIIYSMTPQERTNPEILNGTRRTRIAKGSGTSIQEVNRLLKQFDQTR
KMMKMVTGSKMGKMMPKLKK
NT seq 1323 nt   +upstreamnt  +downstreamnt
atgttcgataatttaagtgagagactggaacggtcttttaagattctgaaaggtgaggga
aaaatcaccgagattaatgtagcggaaacgttgaaggatgtgcgtaaagctttgttggat
gctgacgtgaactataaggtcgccaaaggctttactgatactgtgaaagaaaaagcttta
gggcagaatgtgcttacggctgtgaagcccagccagttgatggtaaagattgtacatgat
gaactgaccgcattgatgggtggtgaaactgccgaattggtgttggaaggtcgtccggca
gttatcctgatgtcaggtctgcaaggttccggtaagactactttctccggtaagctggcc
cgtatgctgaaaaccaagaagaaccgtaagccgctgttggtggcttgtgacgtctatcgt
cccgctgctatcgaacagttaagagtattgggagaacaaatcgaggttcctgtatatagt
gagttggacagcaagaatccggtgcagattgcattgaacgctattcatgaagcaaaagcg
aaagggtatgatttggtcattgtcgatacagccggccgtctggctatcgatgagcagatg
atgaacgagattgaggctatcaagaaagcgataaatccggatgaaactttgtttgtggtc
gattcaatgaccggtcaggatgcggtgaatacagctcgtgagtttaatgaacgtctggac
tttaacggcgtcgtgctgaccaaattggatggtgacacccgtggcggtgctgctctttct
atccgtaccgtggtaaacaagcctatcaagtttgtgggtaccggcgaaaagttggatgct
atcgaccagttccatcctgcacgtatggcagaccgtattctcggcatgggtgatatcgtg
tctttggtagagcgtgcgcaggagcaatatgacgaggaagaggcaaagcgtcttcagaag
aagattgccaagaatcagttcgactttaatgatttcttgagccagattcatcagattaag
aagatgggtaatttgaaagaacttgcatccatgattccgggtgtggggaaagctatcaaa
gatattgatatcgatgataatgcgttcaagagtattgaagcgattatttattccatgact
ccgcaggaacgtacaaatcctgaaattctgaacggaacgcgccgtacacgtatagccaaa
ggtagtggaaccagcattcaggaggtaaaccgtctgttgaaacagtttgaccagactcgc
aagatgatgaagatggtgaccggcagtaagatgggtaagatgatgccgaaacttaaaaag
tga

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