KEGG   Phocaeicola dorei HS1_L_1_B_010: EL88_20165
Entry
EL88_20165        CDS       T03262                                 
Name
(GenBank) pseudouridine synthase
  KO
K06178  23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
Organism
bdo  Phocaeicola dorei HS1_L_1_B_010
Brite
KEGG Orthology (KO) [BR:bdo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bdo03009]
    EL88_20165
Enzymes [BR:bdo01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.22  23S rRNA pseudouridine2605 synthase
     EL88_20165
Ribosome biogenesis [BR:bdo03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    EL88_20165
SSDB
Motif
Pfam: PseudoU_synth_2 S4 S4_2
Other DBs
NCBI-ProteinID: AII65328
Position
complement(4522868..4524325)
AA seq 485 aa
MSTENESRQEGAANEENQNVSRDGGYKSYNRDSNYNRYNNDGEQRPYRPRTNSYNREGGD
RPYRSSYNNGDRPSYNRYNNNGDRPQRPRFNPNSEDGGDQRSYRPRTNYNREGGEQRPYT
PRPRFNNGEEGGERQYRPRTNYNREGGEQRPYTPRPRFNSGEGGEQRSYTPRPRTGGYNQ
GGDRPYRPRTGGYNQGGDRPYRPRTGGYNQGGGYNRPYRPRTADYNPNAKYSLKKQIEYK
DILTDPNEPIRLNKFLANAGICSRREADEFITAGVVSVNGEVVTELGTKIKRTDEVKFHD
EPVSIERKTYILLNKPKDCVTTSDDPQERKTVMDFVKGACKERIYPVGRLDRNTTGVLLL
TNDGDLASKLTHPKYLKKKIYHVYCDKNVTKADLDQIAAGVTLDDGEIHADAISYASETD
KSQVGIEIHSGKNRIVRRIFESLGYKVIKLDRVYFAGLTKKGLRRGDWRYLTEQEVNMLR
MGSFE
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgagtacagaaaatgaaagcagacaagaaggtgctgcaaatgaagaaaaccagaatgta
agccgtgatggtggttataagtcttataacagagacagtaattacaacagatacaacaac
gacggcgaacagcgtccttatcgtcctcgtacgaacagctataatcgcgaaggtggagac
cgtccctaccgttcttcttataacaacggtgaccgtccttcctataatcgctataacaat
aacggagaccgtccgcaacgtccccgctttaatcctaacagtgaggatggaggagaccaa
cgttcataccgtcctcgtacaaattataatcgtgaaggtggcgaacagcgtccgtatact
ccgcgccctcgttttaataatggtgaggaaggtggtgagcgtcaatatcgtccccgcaca
aactataatcgcgaagggggtgagcagcgtccttatactccgcgtccccgttttaacagc
ggtgaagggggtgaacagcgttcttacactccgcgtcctcgtaccggcggttataatcaa
ggcggtgaccgtccttatcgtcctcgtaccggcggttataatcaaggcggcgaccgtcct
tatcgtcctcgtaccggtggttataatcaaggtggtggatacaatcgtccctatcgtccc
cgtacggctgattataacccgaatgcaaagtatagtctgaagaaacagattgaatataaa
gatatattgaccgatccaaatgagccgattcgtctgaacaaattcttggctaatgcaggt
atatgttcccgtcgtgaggctgatgagtttattacagcaggtgtagtcagtgtaaatggt
gaagtggtaaccgaattaggtactaaaatcaagcgtactgacgaagtgaagttccatgac
gaaccggtaagtattgaacgcaaaacttatattttgttgaataaaccgaaggattgtgtg
actacttctgatgatcctcaggaacgtaagactgtaatggattttgtgaaaggtgcttgt
aaggagcgtatttatcctgttgggcgtttagatcgtaatactaccggtgtgttattgtta
actaacgatggtgatttggcttccaagctgactcatcctaagtatttgaagaagaagatt
tatcatgtatattgtgataagaatgtaaccaaggcagatcttgaccaaattgcagcaggt
gtgacattggatgatggagagattcatgcagatgccatcagctatgcatcggaaacagac
aaatcacaagtcggtattgaaatccattccggaaagaaccgtattgtgcgtcgtattttt
gaatccttgggatataaggtgatcaagctggaccgcgtttattttgctggtctgactaaa
aaaggtttgcgccgcggtgactggcgttacctgactgaacaagaagtgaacatgctccgc
atgggctcatttgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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