KEGG   Betaproteobacteria bacterium UKL13-2: AEM42_09415
Entry
AEM42_09415       CDS       T04342                                 
Name
(GenBank) hypothetical protein
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
beb  Betaproteobacteria bacterium UKL13-2
Pathway
beb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:beb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AEM42_09415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:beb03019]
    AEM42_09415
Messenger RNA biogenesis [BR:beb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     AEM42_09415
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 P-loop_SecA CMS1 AAA_22
Other DBs
NCBI-ProteinID: AMS32538
UniProt: A0A142LJZ2
Position
complement(2109778..2111259)
AA seq 493 aa
MSFASLNLAPEILRAVHEQGYTEPTPIQAQAIPAVLNRLDIMGCAQTGTGKTAGFTLPLL
QLLVPFASSSTSPAKHPVRALVLTPTRELAAQVEESVRTYGKYLPLRTALLYGGVDIKPQ
IKSMQGGVEIVVATPGRLLDHLEQKSINLSQVQMLVLDEADRMLDMGFMPAITRILAALP
PMRQNLLFSATFSEDIKKLANGFMRNPTMIEVARRNAPAELVTHQVYEVPALKKHALLAH
LVKSRDMQQVLIFCRMKRDADKLARQLVRDGLSATAIHGDRSQSERSLALDEFKTGKVKL
LVATDVAARGIDIDQLPFVINYEIPNTPEDYVHRIGRTGRAGSPGEAISLVSPEEMDYLH
SIEKLLKREITRLPLPLLGGDRETRPPRERESGFQPRSTASALSEEERRERSEQRRLREA
KDSGRTRRAPFQPIERTPSVTLPSYPHFDFSKPYEPSKSEPIVDTVAVKPAHPGKNIPRP
VGALLGRKKTGKV
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgtcctttgcttcactgaatctcgcaccagaaatccttcgcgccgtacacgaacagggc
tataccgagcccaccccgattcaggcgcaagccattcctgccgtgttgaatcggctcgac
atcatgggctgtgcacaaaccggtaccggtaaaacagcgggatttacgctaccgctgttg
caactgctcgttccatttgccagcagcagtacgtctcccgccaaacatcccgtcagagcg
ctggtgttgacccccacgcgtgagctcgccgcacaagttgaagagtcggttcgcacctat
ggcaagtaccttccgctgcgcaccgcgctgctctatggcggcgtggatatcaagccacag
attaaatcgatgcaaggcggcgtggagatcgtcgtcgcgacgcccggacgcctgcttgac
cacctcgaacaaaagagcatcaatctttcgcaagtgcaaatgctggtgcttgacgaagcc
gaccgtatgctcgacatgggcttcatgccggccatcacacgtattctcgcggcactcccg
ccgatgcgtcagaacctcctgttttcagcaacattctccgaagacatcaagaagctggcc
aacggctttatgcgcaacccgaccatgatcgaggtcgcccgtcgtaacgcgccggcagaa
ctcgtgacgcatcaagtttatgaggtcccggccctgaagaagcatgccctcctcgcacac
ttggtcaaatcacgcgacatgcagcaggtgttgattttctgccgaatgaaacgcgacgca
gataaactcgcgcgccaattggtgcgggacgggttgtcggcaacggcgatccacggcgat
cgcagccagtccgagcgcagcctggcgttagatgaattcaagaccggcaaagtgaagttg
ctggtcgccaccgatgttgccgcacgcggcatcgatattgaccaattgccgtttgtcatc
aactacgaaatcccgaatacgcccgaagactatgtgcaccgcatcgggcgcaccggacgc
gcaggctcgccaggtgaagcaatatcgttggtcagtccagaagaaatggactacctccac
agtatcgaaaaactactcaagcgagaaattacgcggctgccgttgccactactcggcggt
gatcgcgaaacgcggcctccacgcgaacgtgagagtggtttccagccccgcagcaccgcc
tcggcgttgtccgaagaggaacgacgagaacgcagcgaacaacgccgtttacgcgaagcc
aaggattccggtcggacgcggcgtgcacccttccagccaatcgagcgcacaccgagcgtg
accctgccaagttacccacactttgatttcagcaagccttacgagcctagtaagagtgag
ccaatcgttgacacagtcgcagtcaagccagcgcaccccggcaagaacatacctcgcccc
gtgggcgcgttgctgggacgaaagaaaaccggcaaggtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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