KEGG T00965: Bfae

Brachybacterium faecium: Bfae_07110

Entry

Bfae_07110 CDS T00965

Definition

ATP-dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

bfa Brachybacterium faecium

Pathway

bfa03410	Base excision repair
bfa03420	Nucleotide excision repair
bfa03430	Mismatch repair
bfa03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:bfa03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:bfa03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:bfa03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:bfa03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M LigD_N DNA_ligase_A_C DNA_ligase_OB_2 DNA_primase_S

Other DBs

NCBI-GI:

257067903

NCBI-GeneID:

8399259

UniProt:

C7M9M4

Position

809835..812378

AA seq 847 aa
MATREQQVEIDGRRLKLSNLDKVLYPQTGTIKGEVIDYYHRIAPVLVPQATRRPATRKRW
VDGVGTAQSPGKVFFRKDLESHAPQWVPRADIQHSDGTSTYPLVDEPAVLVWLAQLAALE
VHTPQWRFDDALAPAPPDRLVLDLDPGEGAGLPECARVAAWCREILTDMGLESYPVTSGS
KGIHLYAPLDGSADSEEVDAVAHELARALETDHPEEVISTQTRAKRAGKVLVDWSQNNGS
KTTVCPYSLRGRLRPTVAAPRTWEEVEDPALAQLELDEVLARVEDGVDPLAPLGLAAEGD
AEETGPSSAGRARDRLEAYRAKRDPERTPEPVPEAGIGSDAAQEALEDEEPMFVIQEHHA
SSLHWDFRLQHAGVLVSWAVPKGPPLEVDVKRLAVQTEDHPLEYGTFEGTIPEDEYGGGD
VTLWDAGSIEIEKWREDREVIVVCHGRPDGGLGGVPRRFVFLHTGGMRGGRRTAAAKEKA
EANWLLHLMKDQPEPDASRSDDAAPAPEDDAAAPEDAPVAELGEPLAPMLATLGRREDIR
DEDDWAYEMKWDGVRVIATVRGTTVRLTSRGGKDMTAAFPELAELLDAVEPALREAGETV
LDGEIVALDRHDRPSFSRLQQRLGLTRQRDVDRARQQVEAHVMLFDLLVRGGDSLLRTPY
RERREQLFAAVHATEHVQLPHADHGEVEEAIALSKRLQLEGVMAKKESGVYQPGKRTRTW
IKLKNARHQEVVVIGWRHGKGERSGSLGSLLLAVPDSEGELRYAGRVGTGFTDRDLEEIA
ARLRSRSRKTPPVDDVPAADRRDAEWVRADLVGEVQHTERTADGRLRHPVWRGWRPEKNV
ADLQWES

NT seq 2544 nt +upstreamnt +downstreamnt
atggccacgcgagagcagcaggtggagatcgacgggcgcaggctgaagctgtcgaatctc
gacaaggtcctctacccgcagaccggcaccatcaagggcgaggtgatcgactactaccac
cgcatcgccccggtgttggtgccgcaggcgacccgccgccccgccacccgcaagcgctgg
gtcgacggcgtgggaaccgcccagtccccggggaaggtgttcttccgcaaggacctcgag
agccacgccccgcagtgggtcccccgcgccgacatccagcacagcgacggcacctcgacc
tacccgctggtggacgagccggcggtcctggtctggctcgcccagctcgccgcgctcgag
gtccacacgccccagtggcgcttcgacgacgcgctcgccccggcccctcccgaccggttg
gtcctcgacctggaccccggcgagggggcggggctgccggagtgcgcccgggtggccgca
tggtgccgcgagatcctcacggacatggggctcgagagctacccggtcacctccggctcc
aagggcatccacctctatgcgcccctggacggcagcgccgactccgaggaggtggacgcg
gtcgcccacgagctcgcccgtgcgctggagaccgaccaccccgaggaggtcatcagcacc
cagacccgtgcgaagcgcgccggcaaggtgctcgtggactggtcgcagaacaacggcagc
aagaccaccgtgtgcccgtactcgctgcgcgggcgcctgcgccccaccgtcgccgccccg
cgcacctgggaggaggtcgaggatcccgcgctcgcgcagctcgagctcgacgaggtgctc
gcccgggtcgaggacggcgtcgaccccctcgcgcccctcggcctcgcggctgagggcgac
gccgaggagaccggcccgtcgtcggccggacgggcacgcgaccgcctcgaggcgtaccgc
gcgaagcgggacccggagcgcacgcccgagcccgtgccggaggcgggcatcggcagcgac
gccgcgcaggaggccctcgaggacgaggagccgatgttcgtcatccaggagcaccacgcc
tcgagcctgcactgggacttccgcctccagcatgcgggggtgctcgtctcctgggcggtg
ccgaaggggccgccgctcgaggtcgacgtgaagcgcctggcggtgcagaccgaggaccac
cccctcgagtacggcaccttcgagggcaccatccccgaggacgagtacggcggcggggac
gtcaccctctgggacgccggctcgatcgagatcgagaagtggcgcgaggaccgcgaggtg
atcgtggtgtgccacggccggcccgacggtgggctcggcggggtgccgcgccgcttcgtc
ttcctccacaccggcgggatgcgcggagggcgccgcaccgccgcggcgaaggagaaggcg
gaggcgaactggctgctgcacctcatgaaggaccagcccgagcccgacgcgtcgcgctcc
gacgacgccgcccccgcccccgaggacgacgccgccgcccccgaggacgcccccgtcgcc
gagctgggcgagccgctcgccccgatgctcgcgaccctcgggcggcgcgaggacatccgc
gacgaggacgactgggcctacgagatgaaatgggacggcgtgcgcgtgatcgcgacggtc
cgcggcacgacggtgcgcctgaccagccgcggcggcaaggacatgaccgccgcgttcccc
gagctggccgagctcctcgacgcggtggagcctgcgctgcgggaggcgggggagacggtg
ctcgacggggagatcgtggccctggaccgccacgaccggccctccttctcccgcctccag
cagcgcctgggactgacccggcagcgggacgtggaccgcgcccggcagcaggtcgaggcg
cacgtgatgctcttcgacctgctcgtgcggggcggggactcgctgctgcgaacgccctac
cgcgagcggcgcgagcagctgttcgccgcagtgcacgccaccgagcacgtccagctcccg
cacgccgatcacggcgaggtcgaggaggcgatcgccctgtcgaagcggctccagctcgag
ggcgtgatggcgaagaaggagagcggcgtctaccagccgggcaagcgcacccgcacctgg
atcaagctcaagaacgcccggcaccaggaggtggtggtgatcggctggcggcacggcaag
ggggagaggtccggatcgctggggtccctgctgctcgccgtcccggactccgagggcgag
ctgcgctacgcaggccgcgtcggcaccgggttcaccgaccgcgacctcgaggagatcgcc
gcccggctccgctcccggtcccggaagaccccgcccgtcgatgacgtccccgcggcggac
cggcgcgatgccgaatgggtgcgcgcggacctggtgggggaggtgcagcacaccgagcgc
acggccgacgggcggctgcgtcacccggtgtggcgcggatggcggcccgagaagaacgtc
gctgacctgcagtgggagtcctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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