KEGG   Bacteroides fragilis BOB25: VU15_19130
Entry
VU15_19130        CDS       T03897                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
bfb  Bacteroides fragilis BOB25
Pathway
bfb03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bfb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    VU15_19130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfb03021]
    VU15_19130
   03400 DNA repair and recombination proteins [BR:bfb03400]
    VU15_19130
Enzymes [BR:bfb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     VU15_19130
Transcription machinery [BR:bfb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     VU15_19130
DNA repair and recombination proteins [BR:bfb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      VU15_19130
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-ProteinID: AKA53593
UniProt: A0A081UFT3
Position
complement(4666576..4667568)
AA seq 330 aa
MAILAFQKPDKVLMLEADAKFGKFEFRPLEPGFGITVGNALRRILLSSLEGFAITTIRIE
GVEHEFSSVPGVKEDVTNIILNLKQVRFKQVVEEFESEKVSITIENSSEFKAGDIGKYLT
GFEVLNPELVICHLDSKATMQIDITINKGRGYVPADENREYCTDVNVIPIDSIYTPIRNV
KYAVENFRVEQKTDYEKLVLEITTDGSIHPKEALKEAAKILIYHFMLFSDEKITLESNDV
DGNEEFDEEVLHMRQLLKTKLVDMDLSVRALNCLKAADVETLGDLVQFNKTDLLKFRNFG
KKSLTELDDLLESLNLSFGTDISKYKLDKE
NT seq 993 nt   +upstreamnt  +downstreamnt
atggcgatattagcatttcaaaaacctgataaagtattaatgttggaagcggatgccaaa
ttcggtaaattcgaatttcgtcccttggaacccggttttggtattaccgttggtaatgct
ttgcgccgtatcctcctttcttcattagaaggttttgctatcaccactatccgtatagaa
ggtgttgagcacgaattttctagtgttcctggagtaaaagaggatgttaccaacattatc
ttgaatctgaaacaagtgagattcaagcaagtagttgaagaattcgagagcgaaaaggtg
agcatcactatcgagaattctagtgaatttaaagcaggtgacataggtaagtatttgact
ggatttgaagtgttaaatccggaattagttatttgtcatttagattctaaagcaactatg
cagattgacattacaattaacaaaggtcgtggatatgtccccgctgacgaaaaccgcgaa
tattgtaccgatgttaatgtaattccaatcgattcaatctatacgccgatacgtaatgtt
aagtatgctgtagaaaacttccgtgtagagcagaagactgactacgagaaactggtactt
gaaattactaccgacggttccattcacccgaaagaagcgctgaaagaagctgctaaaatt
ctgatttatcactttatgttattctctgacgaaaaaattactcttgaaagtaatgacgtt
gatggtaatgaagagtttgatgaagaagtattgcatatgcgtcagctgttgaaaactaaa
cttgtcgatatggatctgtcagtacgtgccctcaattgcttgaaggctgctgatgttgaa
acattgggcgatttggtacagttcaacaaaactgacctgctgaaattcagaaacttcgga
aagaaatcgcttaccgagcttgatgatttgctggaaagtctgaatctgtcgtttggaacc
gatatttctaaatataaattagataaagaataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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