KEGG   Brevibacillus formosus: BP422_23840
Entry
BP422_23840       CDS       T04939                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
bfm  Brevibacillus formosus
Pathway
bfm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bfm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BP422_23840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bfm03019]
    BP422_23840
   03009 Ribosome biogenesis [BR:bfm03009]
    BP422_23840
Enzymes [BR:bfm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     BP422_23840
Messenger RNA biogenesis [BR:bfm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BP422_23840
Ribosome biogenesis [BR:bfm03009]
 Prokaryotic type
  rRNA helicases
   BP422_23840
SSDB
Motif
Pfam: DEAD Helicase_C ResIII DUF4391 DUF6046
Other DBs
NCBI-ProteinID: ASJ56327
UniProt: A0A220MMI6
Position
complement(5171491..5173146)
AA seq 551 aa
MEMAKLADFWRLGIRKELIHALQENGITEPTPIQEKAIPVVLEGKDVISQAQTGTGKTLA
FVLPILEKADPQATHVQALILTPTRELALQITAEVKKLVAMLDDIHVLAVYGGQDVNQQL
RKLAGKIQVVIATPGRLLDHLRRGTIDLSQVSMFVLDEADQMLHMGFLPEVEDIMAKTPF
DKQTMLFSATMSEQVQSLAKRFMKKPENIQVQGKRITLEDIRQIVVETTDRAKQDTLCSL
LDEQRPFLAVIFCRTKRRASKLNAALQGLDYMSDELHGDLSQAKREDVMKRFREARIQYL
VATDVAARGLDVEGVTHVFNYDIPEDVDSYIHRIGRTGRAKEKGTAFTLVAAKDWGQLRE
IEEGIKLSLERRVIDRGEPGDQKKQTRQQRSEPDRSGKDERRGDKQGRGKGKPAERRQQG
SGERRRDGEGRQQKSGGFDRKPKERDRAAGGFDRKPKERDRAAGGFDRKPKERDRAAGGF
DRKPKDGNRAAGGTGRKPKEGNRAASGFDRKSSGSSKKPVPAQRSSARPNAKPGKRTSSA
PANRTSRKKSR
NT seq 1656 nt   +upstreamnt  +downstreamnt
atggagatggcgaaactggctgatttttggagattaggaattcgcaaggaattgatacac
gcactgcaagaaaacgggattaccgaaccgacaccgattcaggagaaagcaattccagtc
gtgctcgaaggaaaagatgtgatctcacaagcacagacggggacaggtaagacgcttgct
tttgtcctgccgatcctggaaaaagctgatccgcaagcgacgcatgttcaggcattgatt
ttgacgcctacgcgggagcttgctctgcaaatcacggcagaggtgaaaaagctcgtagca
atgctggatgatatccatgtgcttgctgtgtatggtggtcaagatgtcaatcaacagctg
agaaagctggcaggaaaaatacaagtggtcatcgctacgccggggcgtttactggatcat
ctgcggagagggacgatcgatttatcacaggtgtcgatgtttgtcctggatgaggcggat
caaatgctccacatgggttttttgccagaggtagaagatattatggcgaagacgccattc
gataagcagacgatgctgttttcagccacgatgtcggaacaggtgcaatctctcgcgaag
cgctttatgaaaaagccggaaaatatccaggtgcagggcaagcgtattacgttggaggat
attcgtcaaattgtagtagaaacgacagatcgtgcgaagcaagatactctgtgcagtctg
ttggatgaacaacggccgtttctggcggtgatcttttgccgaacgaagcgtagagcgagt
aagttgaatgctgcgctgcaaggtctcgattatatgtctgatgagttgcacggcgatttg
tcgcaggcgaagcgcgaggacgtcatgaagcgattccgcgaggcaaggattcagtacttg
gttgcaacggatgtggcagcgcgtgggctggatgtcgagggtgtcacgcatgtgttcaat
tacgacattccggaagatgtggacagttatatacaccggatcggcagaacggggcgagct
aaggaaaaagggactgcttttaccttggtagcggcgaaggattgggggcagctaagggag
attgaagaagggatcaaactgtccctggagaggcgtgtaattgatcgcggggaaccgggt
gatcaaaagaaacagacacgacagcaaaggtctgagcctgatcgatccgggaaggacgag
cgtcgcggggacaagcaaggtagaggcaaagggaagccagctgagcgaagacagcaaggc
tctggggaacgccgaagagatggggaagggcgtcaacaaaagagcggcggttttgatcgc
aagccgaaggaacgtgaccgtgcagcaggcggtttcgatcgcaagccgaaggaacgtgac
cgtgcagcaggcggttttgatcgcaagccgaaggaacgtgaccgtgcagcaggcggtttt
gatcgcaagccaaaggacggtaaccgagcagcgggcggtactggacgtaagccgaaggaa
ggaaaccgtgcagcaagtggttttgatcgcaagtctagcggctctagcaagaagccagta
cctgcacaacgcagttccgcccgtccgaatgcaaaaccaggcaaaaggacaagctctgct
cctgcaaatcgtacttctcgcaaaaaatccagatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system