KEGG   Brevibacillus formosus: BP422_26655
Entry
BP422_26655       CDS       T04939                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
bfm  Brevibacillus formosus
Pathway
bfm03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bfm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BP422_26655
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfm03021]
    BP422_26655
   03400 DNA repair and recombination proteins [BR:bfm03400]
    BP422_26655
Enzymes [BR:bfm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BP422_26655
Transcription machinery [BR:bfm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BP422_26655
DNA repair and recombination proteins [BR:bfm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BP422_26655
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 DUF211 RAD51D_N
Other DBs
NCBI-ProteinID: ASJ56801
UniProt: A0A0H0SCC7
Position
5718584..5719528
AA seq 314 aa
MIEIEKPKIEVVEVSDDNSYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVRTVQIDG
VLHEFSTVEGVVEDVTEIILNIKGLALKIHSDEEKVIEIDAEGEGVVKAGDIRADSDVEV
LNPDLHIATLANGGRLHIRMTAGRGRGYVQSDGNKSEDLPIGVIPIDSIYTPIKRVNYQV
ENTRVGQMTNYDKLTLEVWTNGSISPEEAVSLGAKIMTEHLNLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTQKTEEDMMKVRNLGRKSLEEVQ
EKLAELGLSLRSDD
NT seq 945 nt   +upstreamnt  +downstreamnt
atgatagaaatagaaaaaccaaaaatcgaggttgtggaagttagcgacgacaactcgtat
ggaaagtttgttgtagaacctctagagcgcggatacggaactacccttggcaactcgctg
agacgaattcttctttcgtccttgccaggcgcggcagttcgtactgttcaaatcgatggg
gttcttcacgaattctctacggttgaaggcgtcgttgaagatgtaaccgagatcatcctg
aacatcaaaggcttggcgctgaagatccattccgatgaagaaaaagtaatcgagatcgat
gcagaaggcgaaggcgttgtcaaagcgggagatatccgtgctgacagtgatgtggaggtc
ttaaaccctgatcttcatattgcaacgttggccaatggcggtcgtctgcatatccgcatg
acagctggacgtggtcgtggttatgttcaatctgacggaaacaaatctgaggatctgcct
attggtgtgattccgattgattcgatctacacgccgatcaagcgcgttaactatcaagtg
gaaaatacccgtgtagggcaaatgaccaactatgacaagttaacacttgaggtttggact
aacggtagcatcagtccggaagaagccgtgagtctcggcgcaaaaatcatgacagagcac
ctgaacctgttcgtcggtctgactgacgaggcgaaggatgcagaaatcatggtagagaag
gaagaggacaagaaagagaaagtcttggagatgactatcgaagagctcgatctttccgtt
cgttcctacaactgcttgaagcgtgccggtattaataccgtgcaagagctgacgcagaag
accgaagaggacatgatgaaagtacgcaatctggggcgcaaatctcttgaagaagttcaa
gaaaagttagctgaactgggcctgtccctgcgcagcgacgactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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