KEGG   Paraburkholderia fungorum: OI25_2339
Entry
OI25_2339         CDS       T03799                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
bfn  Paraburkholderia fungorum
Pathway
bfn03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bfn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    OI25_2339 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfn03021]
    OI25_2339 (rpoZ)
   03400 DNA repair and recombination proteins [BR:bfn03400]
    OI25_2339 (rpoZ)
Enzymes [BR:bfn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     OI25_2339 (rpoZ)
Transcription machinery [BR:bfn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     OI25_2339 (rpoZ)
DNA repair and recombination proteins [BR:bfn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      OI25_2339 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AJZ59724
UniProt: A0A0D5VCX8
Position
1:2622682..2622885
AA seq 67 aa
MARITVEDCLKQIPNRFELALAATYRARQLAQGHTPKIESRDKPTVVALREIAAGQVGVE
MLKKVPV
NT seq 204 nt   +upstreamnt  +downstreamnt
atggcccgcattaccgtcgaagactgtctcaaacagatcccgaaccgtttcgaactcgcg
cttgccgcgacctatcgcgcgcgtcagctcgctcaaggtcacacgccgaagatcgaaagc
cgcgacaagcccaccgtcgtcgcactgcgcgaaatcgcagccggccaggttggcgtcgaa
atgctgaagaaggtgccggtttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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