KEGG T01074: BRAFLDRAFT

Branchiostoma floridae (Florida lancelet): BRAFLDRAFT_118958

Entry

BRAFLDRAFT_118958 CDS T01074

Definition

hypothetical protein

Orthology

K11832

ubiquitin carboxyl-terminal hydrolase 1 [EC:3.1.2.15]

Organism

bfo Branchiostoma floridae (Florida lancelet)

Pathway

bfo03460

Fanconi anemia pathway

Class

Genetic Information Processing; Replication and repair; Fanconi anemia pathway [PATH:bfo03460]

SSDB

Motif

Pfam:

UCH UCH_1

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 892 aa
MGKRLRCRKARRVKKWLRNNVIKPVGKAVRMVFCGCLCLPVEDVDLEDMEWAHALSLEDE
CIHKVVRMVEESRNNITAEGQVEMEAPPRKRSKLSLSRRKDDSSTTSTVAVPSTQQPVYP
LFQMKGSTDEKDENSQVERPLSTSVVCLTGQLQARKQVLAVTSVSQELAQDVSEVQLDMP
TETSLDVSTVMQTYDYSEYVPFVGLVNLTNTCYMNSVLQILIHTPQFAMRMAYLQGDLRD
IYVEAKQHVNIKQKLKFSKPVFGLLNELCRLFRKVGKLKLNYILAPENQNERLAIEPVRT
LDAIGDAHGMFRGSQQHDAQELLRCMLSSLQDANAAILVRQSERREELRVRQEKLAAIMA
KKQCRKQSVKIGNGGSDLQNGHNGAVMVPLKELEPKEPSKVNGLPNGHNSEKGRVSPVGS
VSKTTKKKRLGLGHSKNQIKITRFASPSDPTPHMTVNGHHRHLEASSASNGRVHVTEDEP
AVATKEHLTNGTWDKDVPVAKENGAAVTTKEHLTNGTRDKDIPVNTTLAEQVSCVTLDGN
MADVSDERMDTGPSVNGSASNGHVQVEDVPTSLMDDNALRLTAKDLTALEKEDGINMIED
LFLGQLQYLTTCIECECKTSRTENFMDLSLPIKMNNKEQDLQDATAGTSPDSNPDDKADN
VSLSWSFDTFMAPEKLDNENKYRCEVCGAESEAKRKLYFAKLPKILTIHLIRFEYNPSGY
GMRKISSPIVIPSHLRLDGFCTDTCADRGFRYEIYGMILHEGSSQDSGHYVSYADTSDVP
VVELDKSSQGEREKKLRRAVAQFDYSGNWIKFNDSYVSLVTEEEMGEILYPERTNSFTPY
LLFYKRTDLECPMADMKAKVERNTEETQGSKAESCSKDSPGKEEEKEEDISR

NT seq 2679 nt +upstreamnt +downstreamnt
atggggaagcgtttaagatgccgaaaggctagaagagtgaagaaatggctgaggaacaac
gtgataaagcctgttggtaaagctgtgcgaatggtattttgcgggtgtctttgtttaccc
gtggaggacgtcgacttggaggatatggagtgggctcacgcactgagtctggaggacgag
tgtatccacaaagtcgtacgcatggtagaggagagcaggaacaacatcactgcagaagga
caagtggagatggaggcaccaccgaggaagagatccaagttgagtctgtcgaggagaaaa
gatgactcaagtactactagtacagttgccgtcccatcaacccaacagcctgtgtaccca
ctatttcagatgaagggtagtacagatgagaaggatgagaactctcaagtagagagacca
ctgagcactagtgttgtgtgcctgacaggacagctgcaggccaggaaacaagtactagca
gttactagtgttagccaagagttggcccaggatgttagcgaggtccagctggatatgccc
acagagacgtccttagatgtgtccacagttatgcaaacgtatgactactctgagtatgta
ccctttgtgggacttgttaacctcaccaatacgtgttacatgaacagtgttctgcagatt
ttaatccacacccctcaattcgcgatgaggatggcatacctgcagggcgatctacgggac
atttatgtggaagcaaaacaacatgtcaatataaaacaaaagctgaagttctccaagcct
gtgtttgggcttctgaatgagctctgcaggctcttccgtaaggtggggaaactgaagcta
aactacatcctggctccagagaatcaaaacgagcgcttggccatcgagcccgtccgcacg
ttagatgccataggtgatgcccatgggatgttcaggggttcgcagcaacacgacgctcag
gagttgttgcgatgcatgttatcgagtctacaggatgccaacgctgccatcttggtgcgt
cagtccgagagacgggaggagctaagagtccgtcaggagaaactggccgccatcatggca
aagaagcaatgtaggaaacagtcagtgaagataggtaatggaggcagtgatctgcaaaat
ggacacaatggggcagtcatggttcccttgaaagagttggagccaaaggagccatccaag
gtaaacggccttccaaacgggcacaacagtgagaaaggcagggtttcccccgttggaagc
gtatccaagacgacaaaaaagaaacgactgggtttgggtcattcaaagaaccaaatcaag
atcacgagatttgccagcccaagcgacccaaccccccacatgacagtcaacggtcaccac
aggcacctagaggccagcagtgctagcaatgggagagtgcatgtgacagaagatgaacca
gccgtcgccacaaaggagcatctgaccaatggtacatgggacaaggatgttcccgtcgca
aaggaaaatggcgcagccgtcaccacaaaggagcatctgaccaatggtacaagggacaag
gatattccagtcaataccacactcgcggaacaggtctcctgcgtaacactggatggaaat
atggcggatgtcagcgatgaaaggatggatacagggccgtcggtgaatggcagtgccagc
aacggccatgtgcaggtggaggatgtgcccaccagcctcatggatgacaacgctctcagg
ctgacagctaaggatctgacagccctagagaaggaagatggaatcaacatgatagaggac
ttgtttttaggtcaactacagtatcttaccacttgcattgaatgtgagtgtaagacgtct
cgcacagagaactttatggatctcagcctccccataaaaatgaataataaggaacaggac
cttcaggatgcaacggctggcaccagccctgacagtaaccctgatgacaaggccgacaac
gtctccctgtcatggtcgtttgacaccttcatggctccggagaagcttgacaatgaaaac
aagtacagatgtgaggtctgtggggctgagtcagaggctaaaaggaagctgtatttcgcc
aagctgcccaagatcttgacgatccacttgattcggtttgaatacaacccgtctgggtat
ggtatgagaaagatcagcagccctatagtcatcccgtcccacttgcggcttgacggcttc
tgtacagatacatgtgcggacagaggctttaggtatgagatctatgggatgatacttcac
gagggaagttcccaagactctggacattatgtctcgtatgcagacaccagcgacgtcccc
gtcgtggagttagacaagtccagccagggggagagggagaagaagctccgcagagctgtg
gcacagttcgactattcagggaactggataaagttcaatgactcttacgtcagcctggtc
accgaagaagaaatgggggaaatcttatatcctgagaggacgaactcgttcaccccatac
ttattattctataagagaactgatttagagtgtccaatggcagatatgaaagctaaggtg
gaaaggaacacagaggaaacacagggcagcaaagcggagtcttgtagtaaggactctcca
ggtaaagaggaggagaaggaagaggatataagcagatga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-BFO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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