KEGG T01074: BRAFLDRAFT

Branchiostoma floridae (Florida lancelet): BRAFLDRAFT_119901

Entry

BRAFLDRAFT_119901 CDS T01074

Definition

hypothetical protein

Orthology

K10776

DNA ligase 3 [EC:6.5.1.1]

Organism

bfo Branchiostoma floridae (Florida lancelet)

Pathway

bfo03410

Base excision repair

Module

bfo_M00296

BER complex

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:bfo03410]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C zf-CCHH mRNA_cap_enzyme BRCT

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 928 aa
MHRENKGLRTSRFCVEYAKQGRAGCKKCKQKIEKGLPRIGKIVPNFFHEGDGEMKQWYHV
ACIFETFQRARATTKKIEDASDLEGWEDMEDEEKQTILKLIKELESKAKSPKKKVVQATL
STKGKIQSPTKKAASSATVSDDSPAAGPSSSSSASTSVSMTSPTPTPDIDHKDNAFREFR
RLCALIAEEPGYNAKTKLVSDFLKKGSNGDGFKGDTFLVVKLLLPGVVKRVYNLNNKQLL
KHFANIFGVNLADMLTDLELGDVSETVRKFFEESERCLPAKKSKLTIQEVDESLEILAQM
TKEDDQMRELNKIAKKCTANDLKVVVRLIKHDLRINAGAKHILEGLDPNAYPAFQASRNL
ADVVERVVANGCAPGMKKSLSIKANLMTPVLPMLAEACKSVEMAMRKCPNGMYAEIKYDG
ERVQVHKQGNKFEYFSRSLKPVLPHKVAHFKDYIPKAFPHGSNMILDSEVLLVDTNTGNP
LPFGTLGIHKKQQFSDAQVALFVFDCIYFNGETLMDRPISERRKFLEDNMTVIPNRVVLS
EYRYITEPGDLSDMIGRVIRDGLEGLVLKDTKSIYEPGKRHWLKVKKDYLEQGAMADTAD
LVVLGAFYGTGNKGGLKSVFLMGVYDPDSDKWCTVTKCGNGHDDNTIAKLNKELAMVKIS
KDMSKVPKWLKITKNLVPDFVCADPKKAPVWEITGAEFSKSEAHTADGISIRFPRVTKIR
DDKDWKSATNLKQLKHLFKTSKETSDIPDLLKGKGKSPRKPVKVKVEEEDDDDDDDDDSN
GGASSNGVTPIKGMKRKAEEDSPRTPKKSKPTCRYGATCYQTGKEHLDKFDHPTRKSPKK
SNSAAKSVLPDVFCGIKLFLPDTVENYALLRRYFVAYDGDIVQDYAMSQATHVVEDPEQK
NMNGKTDAQLVTVDWLWQCIKRKQLVPV

NT seq 2787 nt +upstreamnt +downstreamnt
atgcaccgtgagaacaaagggctaagaacaagtaggttctgtgtcgagtacgccaaacag
ggcagggccggctgcaagaagtgcaagcagaagatcgagaagggtctcccccgcatcggc
aagatcgttcccaacttcttccacgagggagacggggagatgaagcagtggtatcacgtc
gcctgcatcttcgagacgttccagagggcgcgcgccaccaccaagaagatcgaggatgcc
tcagacttggagggctgggaagacatggaggatgaggagaaacaaaccattctcaagctc
atcaaagagttggagagcaaggcaaagtctcctaagaagaaggttgtccaggcgacactg
tctactaaaggaaaaattcagtctcccaccaagaaggctgctagcagtgccactgtctca
gatgattccccagcagcaggcccatcatcatcatcatcagccagtacctcggtgtcgatg
acctcccccaccccgacccctgacatagaccacaaggacaacgcgttccgagagttccgc
cggctgtgtgcgctcatcgccgaggaaccgggctacaacgccaagactaaactggtgtca
gacttcctgaagaaaggatccaatggagatggatttaagggcgacactttcctggtggtg
aagcttctccttcccggggtagtgaagagagtgtacaacctgaacaacaagcagctgctc
aagcacttcgctaacatctttggggtcaacctggcagacatgttgactgaccttgagcta
ggcgacgtgtcggagactgtgcggaagttttttgaggagagcgaacgttgcctgccggcc
aagaagagcaaactgaccatccaggaagtggacgagagtctggagatcctcgctcagatg
accaaggaggacgaccagatgagggagctcaacaagattgcaaagaaatgcacagccaat
gatctaaaggtggttgttcgtctgatcaaacacgatctccgaatcaacgcgggagccaag
cacatcctggagggactggaccccaacgcctacccagcattccaagcttcccgtaaccta
gcggacgtggtagagagggtcgttgccaacggttgcgcgcccgggatgaaaaagtcgctc
agcatcaaggctaacctgatgacaccagtgctgccaatgctggctgaggcatgtaagtct
gtggagatggccatgaggaagtgtcctaacgggatgtacgcagagataaagtacgacggg
gagagggtccaggtccacaagcagggcaacaagtttgagtacttcagtcgcagtctcaaa
cctgtgctgcctcacaaggttgcccactttaaggactacatcccgaaggcgttcccccac
ggcagtaacatgatactggacagcgaggtcctattggtcgacacaaacacgggcaacccg
ctgccctttggaaccctgggaatccacaagaagcagcagttcagcgacgcacaagtcgcc
ctgttcgtgttcgactgtatctacttcaatggggaaacccttatggacaggccaatttct
gaaaggagaaaattcctggaggacaacatgacagtgatccccaacagggtggtgttgtcg
gagtacagatatatcaccgagcctggcgacctgtcggacatgatcggacgcgtgatccgc
gacgggctcgagggtctcgtgctgaaggacaccaagagcatctacgagcccggcaaacga
cattggctcaaggtcaaaaaggactacctagagcagggcgccatggcggacacggcagac
ttggtggtgctgggcgcgttctacggaacggggaacaagggtgggctcaagtcggttttc
ctgatgggggtgtacgatccagactccgacaagtggtgcacggtgaccaaatgtgggaac
ggacacgacgacaacacgatcgcaaagctcaacaaagaactggccatggtcaagatcagt
aaagacatgtccaaagtgccgaagtggctgaagatcacaaagaacctggtaccagacttc
gtgtgcgcggacccgaagaaagcgccggtttgggagatcacgggagcggagtttagcaag
tcagaggcgcacacggctgacgggatatccatccgcttcccacgggtcaccaagattcgc
gatgacaaggactggaagtccgccacgaatctaaagcaactcaagcaccttttcaagaca
tccaaggagacctctgacatccccgacctcctgaaggggaagggcaagtcaccacggaaa
cctgtcaaggtcaaagtggaggaggaggatgatgatgatgatgatgatgatgacagcaat
ggtggtgcctccagcaatggggtcacaccgatcaagggcatgaaaagaaaggctgaagaa
gatagtcccagaacaccgaaaaagtccaagcccacgtgtaggtacggagcaacctgctac
cagactggcaaggaacacctggacaagttcgaccaccccaccaggaagtcgccaaaaaag
tcgaacagcgctgctaagagtgtccttcctgatgttttctgtggcatcaaactgttcctg
cctgacacagtggagaactacgccctgctcaggaggtactttgttgcctacgacggtgac
attgtgcaagactacgccatgtcgcaggccacacatgtggtagaggatcccgagcaaaag
aacatgaatggtaagacggatgcccagcttgtgacagtagactggttgtggcagtgcatc
aagaggaaacagcttgttccagtgtga

All links

Pathway (2)   
   KEGG PATHWAY (1)   
   KEGG MODULE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-BFO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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