KEGG T01074: BRAFLDRAFT

Branchiostoma floridae (Florida lancelet): BRAFLDRAFT_124425

Entry

BRAFLDRAFT_124425 CDS T01074

Definition

hypothetical protein

Orthology

K04646

clathrin heavy chain

Organism

bfo Branchiostoma floridae (Florida lancelet)

Pathway

bfo04142	Lysosome
bfo04144	Endocytosis

Class

Cellular Processes; Transport and catabolism; Endocytosis [PATH:bfo04144]
Cellular Processes; Transport and catabolism; Lysosome [PATH:bfo04142]

SSDB

Motif

Pfam:

Clathrin Clathrin_propel Clathrin_H_link Clathrin-link TPR_7 TPR_1 Coatomer_WDAD TPR_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 1533 aa
MAQILPIRFQEHLQLQNVGVNAANIGFSTLTMESDKFICVREKVGDQAQVVIIDLADAAN
PIRRPISADSAIMNPASKVIALKGSGSAGKTLQIFNIEMKSKMKAHNMVEDVTFWKWITV
NTIALVTETAVYHWAMEGDSQPQKMFDRHSSLAGCQIINYRTDAAQKWLLLIGISAQQNR
VVGAMQLYSVDRKVSQPIEGHAAAFGQFKMEGNSEQSTLFCFGVRGAQGGKLHIIEVGQA
PSGNQPFTKKAVDVFFPPEAQNDFPVAMQVSSKHDVIFLVTKYGYIHLYDLESGVCIYMN
RISGDTIFVTAPHEATSGVIGVNRKGQVLSVSVEEDNIIPYITNVLQNPDLALRMAVRNN
LAGAEDLFVRKFNTLFSQGNYSESAKVAANAPKGILRTPQTIQRFQQVPAQAGQTSPLLQ
YFGILLDHGQLNKYESLELCRPVLQQGRKQLLEKWLKEEKLECSEELGDLVKTSDPTLAL
SVYLRANVPNKVIQCFAETGQFQKIILYAKKVGYTPDYIFLLRNVMRINPDQGLQFAQMM
VQDEEPMADINQIVDVFMEMNLVQQCTSFLLDALKNNRPSEGALQTRLLEMNLMSAPQVA
DAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAIVHTHLLNPDWLVNFFG
SLSVEDSLECLKAMLQNNIRQNLQIAVQVATKYHEQLTTQSLIDLFESFKSYEGLFYFLG
SIVNFSQEAEVHFKYIQAACKTGQIKEVERICRESNCYDPEKVKNFLKEAKLTDQLPLII
VCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPARLPVVIGGLLDVDCGEDVIKNLIMVV
RGQFSTDELVAEVEKRNRLKLLLPWLESRIHDGQTEPATHNALAKIYIDANNNPERFLRE
NPYYDSKVVGKYCEKRDPHLACVAYERGQCDQELIQVCNENSLFKSEARYLVKRRDPELW
ATVLIETNEYRRQLIDQVVQTALSETQDPEDISVTVKAFMTADLPNELIELLEKIVLENS
VFSDHRNLQNLLILTAIKADRTRVMEYITRLDNYDAPDIANIAIGSELYEEAFAIFKKFD
VNTSAIQVLIHNISNLDRAYEFAERCNEPGVWSQLAQAQLQQGMVKEAIDSYIKADDPSQ
YMEVVDVANKNGNFEDLVRYLQMARKKSREAYVETELIFAYAQTNRLAELEEFISGPNTA
NIQQVGDRCYDAKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDSARKANSTRTWKEV
CFSCVDGEEFRLAQMCGLHIVVHADELEDLINYYQDRGYFEELIQLLEAALGLERAHMGM
FTELAILYSKYKPQKMREHLELFWSRVNIPKRLEKHELIEFRRISAYLFKGNNRWKQAVE
LCKRDKLFKDALEYAAESRDTETAEELIAWFLEQKNHECFAATLYTCYDLLRPDVILELS
WRHNILDFAMPFFVNVMREYISKVDKLIESEEQRKEEETTTQQPIVYGEPQLMITSGPQI
GVPPQQMPPGMVPGMMPGAAPMPGGYQAPYASM

NT seq 4602 nt +upstreamnt +downstreamnt
atggcgcagattctgcccatccgcttccaggagcacctccagcttcaaaatgttggcgtc
aacgcagcgaatatcgggttcagcaccctcaccatggagtccgacaagttcatctgcgtg
cgggagaaagttggcgaccaggcgcaggtggtcatcatcgacctggctgacgcggccaac
cccattcgccgacccatctccgcagactccgccatcatgaaccccgccagcaaggtcatt
gctttgaaaggcagcggcagtgctggaaagactctgcagatcttcaacattgagatgaag
agtaagatgaaggcccacaacatggtggaggatgtgaccttctggaagtggataactgtc
aacaccatcgccctggtaactgagacggctgtgtaccattgggccatggaaggtgactcg
cagccgcagaagatgtttgaccgccattccagcttggccgggtgccagatcatcaactac
cgcacggacgcagcgcagaagtggcttcttctcatcggcatctcggcacagcaaaacaga
gttgttggtgccatgcagctgtactctgtggaccgtaaggtcagccagccaatcgaaggc
cacgcagcggcgttcggtcagttcaagatggaaggtaactccgaacagtccacgctgttc
tgcttcggagtccggggcgcccagggtgggaagctacatatcattgaggtgggacaggcg
ccttctgggaaccaaccattcaccaagaaggcagtggacgttttcttccctccagaagca
cagaatgacttccctgtggccatgcaggtgagctctaagcatgacgtcatcttccttgtg
accaaatatggctacatccatctgtacgacttggagagcggtgtctgcatctacatgaac
cggatcagtggagacaccatctttgtcaccgcgccccacgaggccaccagcggtgtcatc
ggagtcaaccgtaaaggacaggtcctgtctgtgagtgtggaggaggacaacatcatcccc
tacatcaccaacgtgctgcagaaccctgacctggcactgcgcatggccgtcaggaacaac
ctggccggcgccgaggacctcttcgtgcgcaagttcaacactctgttctcccagggcaac
tactcggagtccgctaaggtcgcagctaacgcaccaaaggggatcctgcgtaccccccag
acgatccagcgtttccagcaggtcccagcgcaggctggccagacgtccccactgctgcag
tacttcggcatcctgctggaccacgggcagctcaacaagtacgagtccctggagctgtgc
cgccccgtcctgcagcaaggcaggaaacagctgctggagaaatggctcaaggaggaaaag
cttgagtgtagcgaggagcttggagatctagtcaagacgagcgaccccacactagcactc
tccgtctaccttcgcgccaacgtgcccaacaaggtcatccagtgttttgcggagaccggg
cagttccagaagatcatcctgtacgccaagaaggttggctacaccccggactacatcttc
ctgctgcgtaacgtgatgcgcatcaaccccgaccagggcctgcagtttgcacagatgatg
gtgcaagacgaggaaccaatggctgacatcaaccagattgttgatgtgtttatggagatg
aacctggtgcagcagtgcacatccttcctcctggatgcgctgaagaacaaccgtccgtca
gagggcgcgctccagacacgcctgctggagatgaacctcatgtctgctccccaggtggca
gacgctatcctcgggaaccagatgttcacgcactacgaccgcgcccacatcgcccagctg
tgcgagaaggcggggctcctgcagcgtgcgctcgagcactacaccgacctgtacgacatc
aagcgtgcaattgtgcacacccacctgctcaaccctgattggctggtcaacttcttcggc
tctctgtccgtggaagattcgctggaatgtctgaaggccatgcttcagaacaatatccga
cagaacctacagatcgccgtgcaggtggccacaaagtaccatgaacagctgaccacccag
tccctcattgacttgttcgagtccttcaagagctacgaggggctgttctacttcctgggc
tccatcgtcaacttcagccaggaagctgaggtccacttcaagtacatccaggctgcctgc
aagactggtcagatcaaggaggttgaacgtatctgccgcgagagcaactgttacgatcca
gagaaggtcaagaacttcctgaaggaagccaaactgacagaccagctcccactgatcatc
gtgtgcgaccgattcgactttgtgcacgacctggtcctgtacctgtaccgcaacaaccta
cagaagtacatcgagatctatgtacagaaggtgaaccctgcgcgtttgcctgttgttatc
ggaggcctgctggacgtggactgtggggaggacgtaatcaagaacctcatcatggttgta
cgtgggcaattctccactgacgagctggtcgctgaggtggagaagagaaacaggttgaag
cttctgctgccgtggctggaaagtcgtatccacgatgggcagaccgagcctgccacccac
aatgcactggccaagatctacattgacgccaacaacaaccctgagaggttcctgagggag
aacccgtactatgacagtaaggtcgtgggcaagtactgtgagaagcgggacccacacctc
gcatgtgtggcctacgaaagggggcagtgtgatcaggaactcattcaggtgtgcaatgag
aactccctgttcaagagcgaggcacgttacctggtgaagcggcgcgaccctgagctgtgg
gccacggtgctgattgaaaccaacgagtaccgcaggcagctcatcgaccaggtggtgcag
acggcactatcagagacccaggacccagaagacatctctgtgaccgtgaaggccttcatg
accgcggacctgcccaacgaactgatcgagctactggagaagattgttctcgagaactcg
gtcttctcggaccacaggaacctacagaacttgttgatcctgacggctatcaaggctgac
cgcacgcgtgtcatggagtacatcacccgcctggacaactacgacgctcctgacatcgcc
aacattgccattggctcggagctgtacgaggaagctttcgccatcttcaagaagtttgac
gtcaacacttctgctatccaggtgttgatccacaacatcagtaacctggaccgtgcgtac
gagtttgcggagcgctgtaacgagccgggcgtgtggagccagctggctcaggcccagctg
cagcaggggatggtgaaggaggccatcgactcctacatcaaggctgacgacccctcccag
tacatggaggtggtggatgtggcaaataagaacggaaacttcgaggacctcgtgcggtac
ctgcagatggcgaggaagaagtcgcgtgaagcgtacgtggagacagagctgatcttcgcc
tacgcccagaccaacaggctggccgaactggaggagttcatctccggccccaacaccgcc
aacatccaacaggtcggcgacaggtgctatgacgcaaagatgtatgatgcggccaaactg
ctgtacaacaacgtgtccaactttgggcgtctggcctccaccctggtccacctgggcgag
taccaggccgccgtggacagcgcccgcaaggccaacagcacgcgcacgtggaaggaggtg
tgcttctcgtgtgtggacggcgaggagttccgtctggcgcagatgtgtggtctgcacatc
gtggtgcacgctgacgagctggaggatctcatcaactactaccaggacagaggatatttt
gaggaactgatccagctgctggaggctgccctgggcctggagcgtgctcacatgggcatg
ttcacggagctggccatcctctactccaagtacaagccacagaagatgagggaacatctg
gagctcttctggtcacgtgtcaacattccaaagaggttggaaaagcacgagctgatcgag
ttccggcggatatcagcgtacctgttcaagggcaacaaccgctggaagcaggcagtcgaa
ctgtgcaagagagacaagctcttcaaggatgccctggaatacgcagccgagtcgcgggac
acggaaacggcagaagagctgatcgcctggttcttggaacagaagaaccacgagtgcttt
gcggcaaccctgtacacctgctatgacctgttacggccagacgtcatcctagagctgtcc
tggaggcataacatcctggactttgccatgccattcttcgtcaatgttatgcgggaatac
atttcaaaggttgacaaattaatagaatcagaggaacagaggaaagaagaagaaaccaca
acacaacagccaatagtctatggtgaaccccagttgatgatcacatctggtcctcagatt
ggtgtcccccctcagcagatgcccccaggaatggtacccggcatgatgccaggtgccgca
cccatgccaggtggctaccaggcaccttacgcctccatgtga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-BFO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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