KEGG T01074: BRAFLDRAFT

Branchiostoma floridae (Florida lancelet): BRAFLDRAFT_131352

Entry

BRAFLDRAFT_131352 CDS T01074

Definition

hypothetical protein

Orthology

K03253

translation initiation factor 3 subunit B

Organism

bfo Branchiostoma floridae (Florida lancelet)

Pathway

bfo03013

RNA transport

Class

Genetic Information Processing; Translation; RNA transport [PATH:bfo03013]

SSDB

Motif

Pfam:

eIF2A RRM_1 RRM_5 RRM_6 Nup35_RRM_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 697 aa
MADERERGGRDRNQSESASLGGSEDQESFVNGHDEPDFSDPEDYVDNISDEELLGDLLKQ
KPKEADGIDSVIVVDNVPQVGPERLEKLQNVIRKIFSKFGKIVSEYFPEGDNGKTKGYIF
LEYSSPANALEAVRNCNGYKLDKQHTFAVNLFSDFDKYSGIPEEWEPPEQQPYKDPGNLW
YWLEDAECNDQYSVIYDGGERTAIFQNTYGGTEQALVEERARWTETYVRWSPKGTYLATF
HQRGIALWGGEKFRQIQRFSHQGVQLIDFSPCEKYMVTFSPLIDSKDEPQAIIIWDINTG
VKKRGFHCENAAQWPIFKWSADGKYFARMGQDSLSVYETPSFGLLEKKSSKIPHIREFFW
SPTDNIIAYWTPEKDNIPARVTLLEIPSRQEIRTKNLFSVADCKIYWQKQGDYLCVKVDR
YTKSKKGLFYNLELFRMREKQIPVDVVEVKEVVNAFAWEPNGEKFVVLHGESPRISASIY
KMSGKVELLKCLEKKQANHLFWSPQGQFVVLAGLRSMNGALEFIDTNDMTVMNVAEHFMA
TDVEWDPTGRYVITAVSWWGHKVDNAFWLWSFQGRLLHKQNLDRFCQLLWRPRPPSPLTA
SQIKKIKKNLKQYQKQFEIKDKMRMSKASKELVEKRHALMQDFEKYRKKKRELNRQQKEQ
RLALRGGVDTDRLDSESDVEDEKVEFFVKEETIVLSK

NT seq 2094 nt +upstreamnt +downstreamnt
atggcggacgaaagagaacgtggtggccgcgacagaaatcagtctgaatccgccagttta
ggcggcagcgaagatcaggaatccttcgtcaacggccacgatgaaccagacttcagtgat
ccagaagattacgtggacaatatttcggacgaagaactcctcggagacctccttaaacag
aaacccaaggaggcagatggcattgactcagtcatagtggtagacaacgtgcctcaggtt
gggcctgaacgactggagaaactccagaatgtcatcaggaagatcttctccaagtttggc
aagatcgtgagcgagtacttcccagagggagacaatggcaagacaaaggggtacattttc
cttgagtactcatccccagccaacgcccttgaagccgtgcggaactgtaacgggtacaaa
ctggacaaacagcacacctttgctgtcaacctattctccgactttgacaagtactctggc
attcctgaggagtgggagccaccagagcaacaaccctacaaagatccaggtaacctgtgg
tactggctggaggatgccgagtgtaacgaccagtacagcgtgatctacgatggcggggaa
aggacggccatcttccaaaacacgtacggtggcaccgaacaggcactggtggaggaacga
gctaggtggactgagacatatgtacgctggtcgcctaaaggcacgtacctggcaacgttt
caccaacgcggcatcgctctgtggggaggagagaagttccgacagatccagcgattcagt
catcaaggagttcaactgatagacttctctccttgtgaaaagtacatggtgaccttcagc
cccctgattgacagtaaggatgaaccccaggccatcatcatctgggacatcaacacaggt
gtgaagaagagaggcttccactgtgagaatgctgcacagtggcccatcttcaagtggagc
gctgatgggaagtactttgctaggatgggacaggacagtctcagtgtgtacgaaacaccg
tcattcggtctcttggaaaagaagagtagcaagattcctcatataagagagttcttctgg
tctcccacggacaacatcatcgcgtactggaccccggagaaggacaacatcccagcccgc
gtcaccctgctggagatcccgtctcgtcaggagatccgcaccaagaacctgttcagcgtg
gccgactgtaagatctactggcagaagcagggagactacctgtgtgtcaaggtggaccgc
tataccaaaagcaaaaagggcctgttctataacctagagttgtttaggatgcgagaaaaa
caaatcccagtggacgttgtggaagtgaaggaggtggtgaatgcctttgcctgggagccc
aatggggagaagtttgtagttctccatggagagtctccccggatcagtgccagcatctac
aagatgtccggcaaggtcgagcttctcaaatgcttggagaagaaacaggccaatcacctg
ttctggagcccacagggacagtttgtggtgctggcgggtcttcgcagcatgaatggtgct
ctggagttcattgataccaacgacatgacagtaatgaacgtggcggaacacttcatggcc
accgacgtggagtgggacccgaccgggcgctacgtcatcacggctgtgtcgtggtgggga
cataaggtggacaatgccttctggctgtggtcattccaaggacgtctgttacacaagcag
aacttggaccgcttctgtcagctgctgtggcgcccgcggcccccctcccccctcaccgcc
tcccagatcaagaagatcaagaagaacttgaagcagtaccagaagcagtttgagatcaag
gacaagatgaggatgtccaaggcctccaaggaattggttgagaagcgccatgctctgatg
caagactttgagaagtaccggaaaaagaagcgtgagctgaaccgtcaacagaaggaacag
cgcttggcactacgaggaggtgtggacactgatcgtctggacagtgaatccgacgtagaa
gacgagaaagttgagttctttgtcaaggaagagaccatcgtcctcagcaaatag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   JGI-BFO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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