KEGG T01074: BRAFLDRAFT

Branchiostoma floridae (Florida lancelet): BRAFLDRAFT_89654

Entry

BRAFLDRAFT_89654 CDS T01074

Definition

hypothetical protein

Orthology

K06584

integrin alpha 8

Organism

bfo Branchiostoma floridae (Florida lancelet)

Pathway

bfo04512

ECM-receptor interaction

Class

Environmental Information Processing; Signaling molecules and interaction; ECM-receptor interaction [PATH:bfo04512]

SSDB

Motif

Pfam:

Integrin_alpha2 FG-GAP VCBS FG-GAP_2 DUF1191 Integrin_alpha

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

AA seq 1161 aa
MDFLHKKMLPSTLKEYKRTFYAFVFALLLVNVHDSSCFNLDTSDATRVTRTGAAGSLFGF
SVDFHGQGDSAWLLAGAPKSQTAQPGVTEGGAVFRCDVTTSISLTPNPCAPIAFDTQGDD
RGVDLQGNILQKTQKSGQWFGATVKSASPAKDVVIACAPRYVYYTDTFNEREPVGNCFLA
AANFTQIRNYSPCKRALDSDWQSNIGWNQVSYCQAGFSADFSPTGPQDRNTHHCQCHTCP
HLCCMLLVVPTFMFFVVVFLFPIPDSQGGFGRLGYCQAGISLDFANDAEQLLLGAVGSYF
WQGQLFSKTLTYDNGVPNLGGDEKKTAEGDAWKDDFHMGYSTASGEFTGDNVPEYVVGVP
RGPGSPDHLKGHVAIYDSNLAVLQAMPEKTALIGEQMGSYFGYSLVVQDVNGDGLDDIIV
GAPMYSSPREHQWDLGRVYVYHLEQPGLSPVFSEPTILSGKVSSGRFGTSIAALGDINQD
GFNDIAVGAPYQTGEGDNMGAVYIYHGSAEGIREEPSQEIKASDFPEPLSAFGFSVAGAK
DVDNNRYPDVAIGAYEADSVVVLKSRPVVNADVTVQVEPEFIDTENKTCTLDDGTAVVCF
DINICASYTGINVPDEVELKYEVTLDALKTVGQRVFFSGRETSQTWSSTLRKADPDSMCL
TQKAFLRNDIRDKLSPITVAAAYSMADPVTPQPDQLLPILNMNQPSRRTRQVNILKDCGP
DNICVPDLKVFVSMQGTEIVVGSDKQLLMDVVVENAGEGAYEALLSVMLPEGVDFVGTGN
PRGGAIITCNLQEEDQRLLVCDLGNPFTARRTQLGLRLSTVQLTGDSNSLNFAFSVNSTN
AEEPGNEGDNHITFPVPVKVNASLSVRGVSLPEQVVFMKMERENEEITHERDIGPEVTHR
YEIRNVGPSDISSSKLKIQWPVHTRTGEDLLYLLAVNVTQGNGRCTVNGDVNPKGVSTES
ASAAQTAEALYALDSSRAARHRRAAATSDKEVAQMPVPQVNDLQVNDTEDCINAECIVID
CTLERLNKDNIAVVQIRSRLWVDTLLEGGFKETTLTSVADFEVLEFPYAITADVLPTARA
EIVTTANPSKPSVGKRPVPLWIIILSACAGLLLLVLIILVLFKCGFFKRQTMQEYTAIKR
NPPTSESPDASSGYISDKTDY

NT seq 3486 nt +upstreamnt +downstreamnt
atggattttctacacaagaagatgttaccctcgacactgaaggaatacaagaggacgttt
tacgcgtttgtgttcgcgctgctgctagtcaatgtgcatgattcaagctgcttcaacctg
gatacctccgatgcgaccagggtcacaagaacgggcgccgccggtagcctcttcggcttc
tctgtggacttccacgggcaaggggacagtgcttggttgttggcgggagcccccaaaagt
cagacggcccagccgggcgtcacggaggggggtgcggtgttccgctgtgacgtcacgacc
agtatttccctcacccccaacccctgcgcacccatcgctttcgacacacaaggtgatgac
agaggagtggacttacaggggaacatcctacagaagacccagaagtcaggacagtggttc
ggagccaccgtcaagagcgcgtctcctgccaaggacgtagtcattgcatgtgcgccacgc
tatgtgtactacacagacacattcaacgagagggagcctgttggtaactgcttcctcgct
gctgcaaacttcactcaaatcaggaactattccccctgcaagcgggcgcttgactctgat
tggcagagtaatatcggttggaatcaagttagttactgccaggccgggtttagtgctgat
ttctcacccactggcccccaggatagaaacactcaccactgccagtgccacacgtgtcca
catctgtgttgcatgctgcttgttgtaccaacatttatgttctttgttgtggtttttttg
ttccccattccagacagccagggtggtttcggccgccttggctactgtcaggccggtatc
agtttggattttgctaatgatgctgaacagcttctgctgggtgctgtggggagctacttt
tggcaaggccaactgttttccaagacgctgacctacgacaatggcgtaccaaacttggga
ggagacgagaagaagacggcagaaggagatgcatggaaagacgacttccacatgggttac
tccactgcatctggagagttcacaggtgacaatgtgcccgagtatgttgtgggtgttccc
cgaggtccagggtctcccgaccacctcaaaggacatgtggccatctacgacagtaacctt
gctgtgctgcaggctatgcctgagaaaactgctctcatcggagaacagatgggatcctac
ttcggttactctctggtggtgcaagatgtcaacggagatggacttgatgacatcatcgta
ggtgcaccaatgtactccagccccagggaacaccagtgggatctgggaagggtctatgtc
taccacctggaacagcctggactctcgcctgtgttcagtgaacccacaattctgagtggg
aaggtctccagtggaaggttcggtacttccatcgctgctttgggtgacatcaaccaagat
ggcttcaacgacattgctgtgggtgccccttaccagaccggggagggagacaacatgggg
gccgtgtacatctaccacgggtcagccgagggcatccgggaggagccatcacaggagata
aaggcatcagacttcccagagcccctgtcagcgtttggcttctccgtggctggagctaag
gatgttgataacaacagatacccagatgtggctatcggtgcgtacgaggcggactctgtt
gtcgtactgaagtcccgcccagtcgtgaacgcggacgtgacggtccaggtggagccggag
tttatcgacaccgagaacaaaacctgcaccctggacgacgggactgccgtggtgtgtttt
gacatcaacatctgtgcttcctacactggcattaatgttcctgatgaagttgaacttaag
tacgaggtgaccctggatgcccttaagaccgtcggacagcgtgtgttcttcagcggccgg
gagacgtctcagacctggtcctccaccttaaggaaggcagacccagactccatgtgtctc
acacagaaggcctttctcaggaatgacatccgtgacaagctgagcccgatcaccgtggcg
gctgcgtacagcatggctgaccccgtgaccccgcagcccgatcagctcctgcccatcctg
aatatgaaccagcccagccggcgcacccgacaggtcaacatcctcaaggactgtgggccg
gacaacatctgtgtgcccgatctcaaggtcttcgtctccatgcaagggacggagatcgtt
gttggaagtgacaaacagctgctgatggacgttgtagtggagaatgctggggagggcgcg
tacgaagcactgctgtccgtcatgctgcctgagggggtcgactttgtgggaacaggaaat
cctcgagggggtgccatcatcacctgtaaccttcaggaggaggaccagaggctgctggtc
tgtgaccttggcaaccctttcacagcacgtcgcacacagctcgggcttcggctgtccact
gttcagctgaccggtgacagcaattcactgaactttgcgttcagtgtcaacagcacaaat
gcagaggaacctggaaatgagggagacaaccacatcaccttccctgtgcctgttaaggtt
aacgcgagcctttctgtcagaggagtgtccctgccagaacaggtggtgtttatgaagatg
gagagagagaatgaggaaatcactcacgagagggacatcgggccggaggtcacacacaga
tacgagatccgtaacgtgggtccaagtgacatcagcagctccaagctgaagatccagtgg
ccggtccacacccgcaccggggaggatctgctgtacctgctcgctgtcaacgtaacccag
ggcaacgggcgctgtaccgtcaacggggacgtcaacccgaaaggagtctctactgagtca
gcgtctgcagcacaaacagcggaggccctgtacgccctggactcctcccgtgctgccaga
catcgcagggcggcagcaacaagcgacaaggaagtggcacaaatgcctgtaccacaggtc
aatgacctacaggtcaatgacacagaggactgcatcaatgctgagtgtattgtgatcgac
tgtacgttagagaggctgaacaaggataacatcgcagtggtgcagattaggtccagactg
tgggtggacacactgctggagggtggattcaaagagacgacactaacatccgtggcagac
ttcgaggtgttggagttcccgtacgccattactgctgatgttctacctacagccagggca
gagattgtgacgacagctaaccccagtaagccgtctgtggggaagcggccggtgcccctg
tggatcatcatcctgtcagcctgtgccgggctgctgctgctggtgctcatcatacttgta
ctcttcaagtgtggtttcttcaagagacaaacgatgcaggagtacacggccatcaagaga
aacccccccaccagcgagagcccagacgcgagcagcggctacatcagcgacaagacggac
tactag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-BFO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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