KEGG B.fragilis_NCTC9343: BF0302

Bacteroides fragilis NCTC9343: BF0302

Entry

BF0302 CDS B.fragilis_NCTC9343

Definition putative exported carbohydrate-binding protein

Class

SSDB

Motif Pfam: Glyco_hydro_43 CBM_6 F5_F8_type_C Laminin_G_2
PROSITE: FA58C_3 CBM6

Other DBs NCBI-GI: 60679893
NCBI-GeneID: 3288420
GeneDB: BF0302
UniProt: Q5LIF1

Position 355163..358156

AA seq 997 aa
MFINSLRKSPFSCSPGLILLGAFTLLSVPVYGQQIQQAERQVQQVPFLQFNFDEQGGETA
RNSGRGGSKYDARINGGTVEWGPGLQQGAARLSNKGHFKLPDGVLAHVKDFTLSVWVYLN
EQSDNQTVCTFACGTDRYLILTTQRGNEENGVSLVMTKTQESGNHTDKEERIAYTRQKGK
LSANAWHHLAFTLKGSVGTLYVDGVKAEIKTDFTVNPSLLGNTTDNYIGRPTWPDPYLNG
GIDDFRLYDYALTDRQVYELASVADGRLVQEDRDGLSLGDLSAVTTDLVLPSSGKSGTTI
SWSSAQGQYISDSGKLYRPDAGTGNKKATLTATVRKGDVALTKDFVLTVKDIGTEPEDVN
VFSMQTGNPTVPAYLADASFYYDDRTKTFYAFGTNDGAGGENVYPAQMWYSKDCKEWKNE
VIAFPKSWTDYAGTLCVWAPSIEYNPDTKKYYLMYSIASNTFVGMADDLLGPWEDANGAA
PGKMLFKGYDGQFFMDDDRTMYIVTDSWHFKIMKLKFDEAGKIYIDNSDPVFAKSDSNPF
IGTYHYTQIEEIKNAFEASFIFKRNNLYYLMWSFNGSENYNVRYAVADKITGPYREINRS
MTVPVLQRDDANRILGPGHHSMFCYGGRTFIAYHRQHYPFVDSKRQTCIDEVFFNEDGSI
RPITPTHKGVTVAPDVPGDHRTNLALGKQTLTSSARVYDDSEFAPRYRTHGISFCYAGNF
AVDENYGTHWDPGVGAHKPWLIVDLGSECKVDEIETIFEFTSRTYKYKLEYLSQKEAGSL
DAASGSHLWKVFADRSTDGVGQSPVTDTKPGNSPVKARFIRLTILEGVDIPLRADGLDKK
NAENALSIFELKVFGEDRSDDLNRIFKAESFHNLYGIALEKNAAENGFIMGQIDNNDYLL
YRNVDLGKGAGTFTAKVASGTEGGKIEVYLGSLKGKPIGVLEVGNTGGDQSWEIKSTSLE
RIARGRQEKLYLLFKGKTGTENLLKLDWFQFTKDRMK

NT seq 2994 nt +upstreamnt +downstreamnt
atgtttataaattctttaaggaaatcccctttttcctgttctccgggattgatcctgttg
ggggcgtttaccctgttatctgttcctgtgtatgggcagcagatacaacaggcggaaaga
caggtgcagcaagttcctttccttcaattcaacttcgatgaacagggaggagagacagcc
cgtaacagtggaagaggaggctcaaaatatgatgcccggatcaacggaggtacggtggag
tgggggccgggtctgcagcagggagcggcaagactcagtaacaaaggacacttcaagtta
ccggacggagtcctggcacatgtgaaagatttcactttgtctgtctgggtctatctgaat
gaacagtctgacaaccaaacggtgtgcacgtttgcttgcggaacagaccgttacctgatt
ttgacaacccaaagagggaatgaagagaacggcgtttctctggttatgacgaagacacag
gagagtggaaatcataccgacaaggaagaacgcattgcatatacccgtcagaaaggtaaa
ctgtcggctaacgcctggcatcatcttgctttcactctgaaagggagtgtcggcactctt
tatgtagacggagtgaaagctgaaataaagacggacttcaccgtgaatccttcattgtta
ggtaatacgaccgataattacattggccggccgacctggcccgatccatatctgaatggc
gggattgatgatttcaggttgtatgactatgccttgacagaccggcaggtatacgaactt
gcatcggtagcggacgggcggttggtgcaggaagacagggacggactttcgttgggcgat
ttgtcggcggtaaccaccgaccttgtgttgccttcgtccggtaagagcggtactaccatc
tcgtggagctcggctcaggggcagtacatcagtgacagtggaaagctttaccgccccgat
gcgggaaccggaaacaagaaggcaaccctgacagcaacggtccggaagggagacgtggct
ttgactaaagactttgttttgaccgtcaaggatatagggactgaaccggaagatgtgaat
gtcttttcgatgcagacgggaaatccgactgtgcctgcttatctggcagacgcatctttc
tattatgatgaccggaccaagactttttatgctttcggaaccaatgacggagcgggtggt
gaaaatgtgtatccagcccagatgtggtactccaaggactgtaaggaatggaagaatgaa
gtgatcgccttcccaaaatcatggacggactatgccgggaccttgtgtgtatgggctccc
agtatcgaatacaatccggatacaaagaagtattatctgatgtatagcattgcttcgaat
acctttgtcggtatggcggacgacctcttggggccgtgggaagatgccaatggggcagct
cccggtaagatgcttttcaagggatatgacggacagttttttatggatgatgaccggacg
atgtatattgtaactgactcctggcactttaagattatgaagttgaagttcgatgaggcc
ggaaagatctatattgacaacagtgatccggtattcgccaaaagcgattccaatccattt
atcggcacttaccactatacgcagatagaagagataaaaaatgcttttgaagcttcgttt
atttttaagagaaataatttatactacctgatgtggtcgtttaacggtagtgagaattat
aatgtccgatatgccgtagccgataagatcacggggccttaccgggagatcaaccggtct
atgactgttcctgtattgcaacgtgatgatgccaatcggattttgggtcccggacatcat
tcgatgttctgttacggagggcgtacgtttattgcttatcatcggcaacattatcctttt
gtagacagtaaacggcagacttgtatcgacgaagttttctttaatgaggatggaagtatc
cgtcccattactccaacccacaagggggtaacggttgctcccgatgttccgggcgatcat
cgtacgaatcttgctttaggaaagcagaccttgacctcttcggcgagggtgtatgatgat
tcggaatttgctccccgctatcgtacacacggcatttcattctgttatgccggtaacttt
gccgtagacgagaattacgggacccattgggatcccggagtcggtgcacataagccttgg
ctgattgtagatttgggcagcgagtgtaaagtggatgagatagagacaatttttgagttt
acaagccgtacttacaagtataaactcgaatatttgtcacagaaagaagccggcagtctg
gatgcagcctccggcagtcatttgtggaaagtgtttgcagaccggagtacggacggtgtc
ggacaatctccggtgacggatacgaagccgggcaattctccggtgaaagcaaggtttatc
cgtctgaccattctggaaggggttgacatccccctgagagcagacgggctggacaagaag
aatgccgaaaatgcattaagtatttttgaattgaaagtttttggagaagatcggtcggat
gacctgaaccgtatttttaaggcggaaagcttccataacctatatgggatagctcttgaa
aagaatgcggccgagaacggatttatcatggggcagatcgataataacgattatttgctc
taccggaatgtagatttaggcaaaggggcaggcacgtttacagctaaagttgcttcaggt
accgaaggcgggaagatagaggtttatctgggttccttgaagggaaaacctatcggagtg
ctcgaagtgggcaatacgggtggcgaccaatcctgggaaatcaagtcaacgtctcttgaa
cggattgcgagagggcggcaggagaaattgtatctgctgttcaaaggtaagaccggtacc
gagaacctattgaaactggattggtttcagtttactaaagaccggatgaaataa

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   GENEDB-BFS (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (4)   
   PROSITE (2)   
All databases (15)

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