KEGG   Brevibacterium flavum: C628_06485
Entry
C628_06485        CDS       T04445                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
bfv  Brevibacterium flavum
Pathway
bfv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bfv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C628_06485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bfv03021]
    C628_06485
   03019 Messenger RNA biogenesis [BR:bfv03019]
    C628_06485
Transcription machinery [BR:bfv03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     C628_06485
Messenger RNA biogenesis [BR:bfv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     C628_06485
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind Rho_N Spore_III_AA AAA_25 NACHT AAA_22
Other DBs
NCBI-ProteinID: ANR62264
UniProt: A0AA86GWD2
Position
1388206..1390638
AA seq 810 aa
MTTTDNTAANQGELTALRLPDLRKIAADLGLKGTSALRKGDLINAISAAREGKPTAAAKK
TSPRKAPSRTRATQPSAPVEQAQEAPAQTSTAPASAPSEETPAAPARRGRRRVTTTATTP
EPAAPAQSQPAEAQPAQTQAAQQEELPVAAKESAPATENTQGQSQGQAQGDEHDDRFESR
SAARRARRNRQRQIHRDGDDNANANTESEQNTPAQNATAQAESEQTAAPAQAEAAEQNQN
DNSESSENRSDNYRNNNRRSRNNRNNRNYRDNNESSDNAGQSSNDDADNNQARSEDNNDD
RRSRNNRNNDRNDRNNRNYRDNNESSDNAGQSSNDDADNNQARSEDNNDDRRSRNNRNND
RNDRNDRNYRDNHNDDNDDRRNRRGRRNRRGRNDRNDRDNRDNRDNRDNSNDGDNNQQDE
LQQVAGILDIVDHNVAFVRTTGYHAAPSDVFVSNQLIRRMGLRSGDAIEGQVRMNQGGGN
HNNHGRNRQKYNNLVRVEMVNGLPAEETRNRPEFGKLTPLYPNQRLHLETEQKILTTRVI
DLIMPIGKGQRALIVSPPKAGKTTILQNIANAISTNNPECYLMVVLVDERPEEVTDMQRS
VNGEVIASTFDRPPSEHTAVAELAIERAKRLVEQGQDVVVLLDSITRLGRAYNNSSPASG
RILSGGVDSNALYPPKRFLGAARNIENGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAE
LKLDRKISERRVFPAVDVNPSGTRKDELLLNPDEARIMHKLRRILSALDNQQAIDLLIKQ
LKKTKSNAEFLMQVASSAPMAGTEKEEDYS
NT seq 2433 nt   +upstreamnt  +downstreamnt
gtgacaaccacagacaacaccgcagcgaatcagggtgaactgaccgccctccgactgccg
gatctgcgcaaaattgccgccgaccttgggctcaagggaacctcggcattgcgtaagggc
gatctgatcaacgccatctctgcagcccgcgagggtaagccaaccgcagctgcgaagaag
acttccccacgcaaggccccatcacgcacccgtgcgacacagccttccgcaccggttgag
caagcacaagaagctcccgcgcaaacttcaactgcacctgcttcagcaccatctgaagag
actcccgcagctcccgctcgtcgtggacgtcgccgtgtaaccaccaccgcgaccacccca
gagccagcagcgcctgcacaatcccagcctgcagaagctcaaccagcacagactcaggct
gcacagcaagaagaacttcctgttgcagcgaaggagtccgcaccagctacagaaaacact
cagggccaatcccagggccaagctcagggcgatgagcacgatgatcgctttgagtcccgt
tctgctgcacgccgagcacgccgcaaccgtcagcgccagatccaccgcgatggcgatgac
aatgcgaatgcaaacacagagtctgagcagaacacccctgcccagaatgcaaccgcacag
gctgagtctgagcagactgcagctcctgcacaggctgaagcagctgagcagaaccagaac
gataacagcgagtcctccgagaaccgcagcgataactaccgcaacaacaatcgtcgttcc
cgcaacaaccggaacaatcgcaattaccgcgataacaacgagtcctctgataatgcagga
cagtccagcaatgatgatgccgacaacaatcaggcacggtctgaggacaataacgacgat
cgccgttctcgtaataaccgtaacaacgaccgcaatgatcgtaacaatcgcaattaccgc
gataacaacgagtcctctgataatgcaggacagtccagcaatgatgatgccgacaacaat
caggcacggtctgaggacaataacgacgatcgccgttctcgtaataaccgtaacaacgac
cgcaatgatcgtaacgatcgcaattaccgcgacaaccacaacgacgacaacgatgatcgc
cgcaaccgtcgcggacgccgcaaccgccgtggacgcaacgaccgtaacgatcgcgataac
cgggataaccgggataaccgcgacaacagcaacgatggcgacaacaaccagcaagatgag
ctgcagcaggtagcaggcatcctggacatcgtggaccataacgtcgcattcgtgcgcacc
accggttaccatgctgcaccttctgacgtgtttgtcagcaaccagctgatccgccgtatg
ggtcttcgttccggtgacgccattgaaggtcaggttcgcatgaaccagggtggtggcaac
cacaacaaccatggtcgcaaccgtcagaagtacaacaacttggtgcgcgtggagatggtt
aacggtcttcctgctgaagagactcgcaaccgtcctgagttcggcaagctgactcctctg
tacccgaaccagcgtctgcatttggaaactgagcagaagattcttaccactcgtgtgatc
gacttgatcatgcctattggtaagggacagcgtgctttgattgtgtcgccacctaaggct
ggtaagaccacgatcctgcagaacattgcgaacgctatttccaccaacaacccagagtgc
tacctcatggttgttttggttgatgagcgtccggaagaagttactgatatgcagcgctcc
gtcaacggcgaagtgattgcttctacttttgatcgtccaccatcagagcacactgcggtt
gctgagctggcgattgagcgtgcgaagcgcctggtggagcagggccaggacgtcgttgtt
ctgcttgactccattactcgtttgggccgtgcgtacaacaacagctcacctgcatcggga
cgtattttgtccggtggtgtggattccaatgcactgtacccgccgaagcgtttcttgggt
gctgctcgaaacatcgaaaatggtggatctttgaccatcatcgcaactgccatggtggaa
accggctctgctggtgacaccgtgatcttcgaggagttcaagggcactggtaacgctgag
ctgaagctggatcgtaagatctctgagcgccgcgttttcccagctgtggatgttaatcct
tctggtactcgtaaggacgagctgttgctcaacccggacgaggctcgcattatgcacaag
ctgcgtcgtattctgtctgcacttgataatcagcaagccattgatctgttgatcaagcag
ctgaagaagaccaagtccaatgcggaattcctcatgcaggttgcttccagcgctccaatg
gcaggcacagaaaaagaggaggattactcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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