KEGG   Brevibacterium flavum: C628_07435
Entry
C628_07435        CDS       T04445                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
bfv  Brevibacterium flavum
Pathway
bfv03030  DNA replication
bfv03410  Base excision repair
bfv03420  Nucleotide excision repair
bfv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bfv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C628_07435
   03410 Base excision repair
    C628_07435
   03420 Nucleotide excision repair
    C628_07435
   03440 Homologous recombination
    C628_07435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bfv03032]
    C628_07435
   03400 DNA repair and recombination proteins [BR:bfv03400]
    C628_07435
Enzymes [BR:bfv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     C628_07435
DNA replication proteins [BR:bfv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     C628_07435
DNA repair and recombination proteins [BR:bfv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     C628_07435
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C628_07435
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_lambd_f DNA_pol_A_exo1 HHH_5 HHH_2 Glyco_transf_4
Other DBs
NCBI-ProteinID: ANR62438
UniProt: A0AA86LB38
Position
1579015..1581657
AA seq 880 aa
MLIDGHSMAFRAFFALPAENFSTSGGQATNAVYGFLSMLSTLLKDEQPTHVAVAFDVGRK
TFRTDMFPAYKAQRDATPPEFKGQVEILKEVLSTLGITTIEKIDFEADDVIATLSVAAKP
LGFKTLIVTGDRDSFQLVNDTTTVLYPMKGVSVLHRFTPEAVEEKYGLTPRQYPEFAALR
GDPSDNLPNIPGVGEKTATKWIAQYETLDNLLDHADEIKGKVGASLRERIEQVRMNRKLT
EMVKDLELPLGPDDFDMKPVQVAEVAAKFDDLEFGTSLRERVLAVVKAEGSAAPVEKVEA
EQVVVDTQSLAQWLPARAGQALALALTGVAKPAGGDAYALAIADTKRHAVLVDLADISAE
DEKALATWLASEDPKMLHGAKAAYHMLAGRGFELNGVVHDTAIAAYLLRPGQRTYELADV
YQRHLQRQLSTNDNGGQLTLLDAADDQSLVDDVIAILELSEELTKQLQEIQAFELYHDLE
IPLSGILARMEAIGIAVDVATLEEQLKTFIGQVAQEEEAARELAEDPTLNLSSPKQLQVV
LFETFGMPKTKKTKTGYSTAAAEIEALAIKNPHPFLDHLLAHRQYQKMKTTLEGLIREVA
PDGRIHTTFNQTVASTGRLSSTDPNLQNIPVRTEAGRKIRSGFVVGEGYETLLTADYSQI
EMRVMAHLSQDPGLIEAYREGEDLHNYVGSKVFNVPIDGVTPELRRQVKAMSYGLVYGLS
AFGLSQQLSIPAGEAKQIMESYFERFGGVQRYLREIVEEARKAGYTETLFGRRRYLPELT
SDNRVARENAERAALNAPIQGTAADIIKVAMIRVDRSLKEAAVKSRVLLQVHDELVVEVA
AGELEQVREILEREMDNAIKLSVPLEVSAGDGVNWDAAAH
NT seq 2643 nt   +upstreamnt  +downstreamnt
atgcttatcgacggccactcgatggctttccgcgcattctttgctttgccggctgagaat
ttctccacgtcgggcgggcaggccaccaatgctgtctacggctttctctcgatgctgtcc
acgttgttgaaggatgagcagcctactcatgtggcggtggctttcgatgtggggcgtaag
acgttccgtaccgatatgttcccggcgtataaggcgcagcgtgatgcaacgccacctgag
tttaagggccaggtggagatcctcaaggaggtgttgtccactttgggaattacgactatt
gagaaaatcgattttgaggctgatgatgtgatcgccacgttgtctgtggcggcgaaacct
ttaggctttaagacgctgattgttacgggtgaccgtgattccttccagttggtcaatgac
accaccacggtgttgtatccgatgaagggcgtgtctgtgctacaccgtttcacgccggaa
gcggtggaggagaagtatggactgacaccgaggcagtatccggagtttgcagcgctgcgt
ggtgatccttccgataacttgcctaatattcctggcgtgggcgagaagactgctaccaag
tggattgcccagtatgaaactttggataatttgctcgatcacgctgatgagatcaagggc
aaggttggtgctagcctgcgtgagcgcattgagcaggtccggatgaaccgcaagctcacg
gagatggtgaaggatctggagctgccgcttggtccggacgattttgatatgaagcctgtg
caggttgcggaggttgcggcgaagtttgacgatctggagttcggcaccagtttgcgtgag
cgggtgctggcggtggtgaaggccgagggttccgctgcccccgtggagaaagtggaagcg
gaacaggttgtcgtcgatacgcaatctttggcgcaatggctgcctgctagggctggccag
gcgcttgctttagcgctgactggagtggctaaacctgctggtggcgacgcgtatgcgctg
gcgattgcggataccaagcgccatgcagtgttggttgatttggcggatatttcggcggag
gacgagaaggcgctggcgacatggttggcgtcggaggatccaaagatgctgcacggcgcc
aaggccgcctatcacatgctcgctgggcgcggttttgagctgaacggcgtggtgcatgac
acggcgattgcggcttacttgctgcgtccggggcaacggacctatgagcttgccgacgtc
taccagcggcatcttcaacgccagttgtccacaaacgacaatggcggccagctcacactg
ctcgacgcagctgatgaccaatcgcttgttgatgatgtcattgcaatccttgagctgtct
gaagaactgaccaaacagcttcaggagattcaagcttttgagctttaccatgacctggaa
attccgctgtcgggaattctggcgcgcatggaggccatcggtatcgccgtggatgtggcc
actttggaagagcagttgaagactttcattggtcaggttgctcaggaagaggaagcagct
cgcgagctcgctgaggatccaaccctgaatctctcgagcccgaagcagctgcaagtggtg
ctttttgagacgttcggaatgccgaaaaccaagaaaaccaagaccggctactctacggct
gccgcggaaattgaagccctagcgatcaagaatccgcacccattcctagatcacctgttg
gcacaccgtcagtaccaaaagatgaagaccactctggaaggtctcatccgtgaggtggct
cctgatggccgtattcacaccaccttcaaccagacggtggcgtctacgggacgtttgtca
tccactgatcccaacctgcaaaacattcctgtgcgcactgaggctggccgaaagattcgt
tcgggattcgtcgtaggcgaggggtatgaaaccttgctgactgccgactactcgcagatt
gaaatgcgcgtgatggctcacctttcccaggacccaggcttgattgaggcgtaccgcgaa
ggcgaagacctgcacaattacgtgggttccaaggtgtttaatgtgcccatcgatggcgtg
acccctgagctgcgtcgccaggttaaggccatgtcttacggtctggtgtacggcttgtcc
gcgtttggtttgtctcagcagctgagcattcctgctggcgaagcgaagcagatcatggag
tcctacttcgagcgcttcggcggagtacagcgctacctccgggagatcgtggaggaggct
cgaaaagctggttatacggaaacgctctttgggcgtcgtcgctacctgccggaactgacc
tcggataaccgtgtcgctcgtgaaaacgctgaacgtgccgcactgaacgccccgattcag
ggaactgccgccgacatcatcaaggtggccatgatccgggtggaccgttcactcaaggaa
gctgccgtgaaatctcgcgtgctgcttcaggtgcatgatgaattggtcgtggaagtagcg
gccggtgagttggaacaagtccgtgagattctggaacgcgaaatggataacgccatcaag
ctgtccgttcctttggaagtttcagctggtgatggcgttaactgggatgctgcagcgcac
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (22)   

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