KEGG T01464: bgla

Burkholderia gladioli: bgla_1g12430

Entry

bgla_1g12430 CDS T01464

Definition

DNA primase, small subunit

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

bgd Burkholderia gladioli

Pathway

bgd03410	Base excision repair
bgd03420	Nucleotide excision repair
bgd03430	Mismatch repair
bgd03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:bgd03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:bgd03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:bgd03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:bgd03450]

SSDB

Motif

Pfam:

LigD_N DNA_ligase_A_C DNA_ligase_A_M DNA_primase_S

Other DBs

NCBI-GI:

330816171

NCBI-GeneID:

10477740

UniProt:

F2LD61

Position

1:1383022..1385700

AA seq 892 aa
MASKLAEYQRKRRFDASPEPAGKRGAQARPRHDPERELHFVVQEHHARRLHYDFRLELDG
VLKSWAVPKGPSTEPAEKRLAVHVEDHPLDYAGFEGEIPPGHYGAGSVRIDDQGVWRPDG
GIAGARRGYREGKLSFELDGHRLHGRWSLVRTHLPERNGKSSWLLIKARDEQAGPPGGER
IKAARKQPATAAAKRAGERAETHGDKHAEKHVEKQAEKRGAPPPRGKRAADRAGRREALP
ATLAPQLATLVAAPPEGEDWRYEMKFDGYRVLIRIAGRGRRRSVQVFTREGKDWSAKFRR
QCAALADLPVNNAWLDAEAVVLDARGLPDFGALQQALSAGEDAAIVFFVFDLPFLDGRAL
ADLPLDTRRERLAACFGGAGRQAVQLSPTLKGEPAELLAAASRAGLEGLIGKRADSPYRA
GRSASWIKLKCRQRQEFVIGGFSEPRGSRSGFGALLLGVHERPAQGRRRAGGLAYVGRVG
TGFDRRALDAIAARLRKIERGDAPFAVPPAERGDAVHWVEPRLVAECEFAGWTADGLVRQ
AAFIGLREDKPAGQIVRETAAPAGGQPTGGRMRTDHQATGSRSRGKAANHATGRNDDATV
AGVRVTHPERVVDTESGLRKIDVVRYYAAIAEHLLPQLAGRPVSLVRYMKGIDGPSFFQK
HAGPRGMGFVTRHPGLDPGHDALITLDDREALVGAAQFDALEFHTWNACVDRIERPDRLV
FDLDPDPALPWRAMIEAAQALRALLDALGLPCFCKTSGGKGLHLVVPITRHASWDQARDF
SQAVAQHLAGVAPERFSAKMGAQNRKGRIFVDYLRNGRGASTVAAWSARARPGMGVSVPI
DWDELPGTRGGAQWTIAEVPQRLASLRRDPWDGYEAARRRLTAAMRERLGKL

NT seq 2679 nt +upstreamnt +downstreamnt
atggccagcaagctcgccgaataccagcgcaaacgccgcttcgacgcgagcccggaaccg
gccggcaagcgcggcgcccaggcgcgcccgcgccacgatcccgagcgcgagctgcacttc
gtggtgcaggagcatcacgcgcggcgcctgcattacgacttccgcctcgaactcgacggc
gtgctgaagtcctgggcagtgccgaaggggccgagcaccgaaccggccgagaagcggctc
gcggtgcatgtcgaggatcacccgctcgactatgccggcttcgagggcgagataccgccc
ggccactacggcgcgggcagcgtgcgcatcgacgaccagggcgtctggcggcccgatggc
ggtatcgccggcgcgcggcgcggctatcgcgagggcaagctcagtttcgaactcgatggc
catcgtctgcatggacgctggtcgctggtgcgcacgcaccttcccgagcgcaacggcaag
tcgtcgtggctgctgatcaaggcgcgcgacgagcaggcgggcccgccgggcggcgagcgc
atcaaggccgcgcgcaagcagccggccacggcggcggccaagcgtgccggcgagcgtgcc
gaaacgcatggcgacaagcatgcagagaagcatgtcgagaagcaggcagagaagcgcggc
gcaccaccgccacgcggcaagcgcgcggcggatcgcgccggccggcgcgaggcactgccg
gccacgctcgcgccgcagttggcgacgctcgtggccgcgccgcccgagggcgaggactgg
cgctacgagatgaagttcgacggctatcgcgtgctgatccgcattgccggccgcggccgc
cgacgctcggtgcaggtgttcacgcgcgagggcaaggactggagcgcgaaattccgccgg
caatgcgccgcgctcgccgacctgccggtgaacaacgcctggctggacgccgaggccgtg
gtgctcgacgcgcgcggcctgcccgatttcggggccctgcagcaggcgctgtcggccggc
gaggacgccgccatcgtgttcttcgtgttcgacctgccctttctcgatggccgggcgctg
gccgacctgccgctcgatacgcgccgcgagcggctggcggcctgcttcggcggcgcgggc
aggcaagccgtgcagctttcgccgacgctcaagggcgagccggccgagctgctcgccgcg
gcgtcacgggccggcctcgaaggcctgatcggcaagcgcgccgacagcccttatcgcgcc
gggcgcagcgcgtcgtggatcaagctgaagtgccgccagcgccaggaattcgtgatcggc
ggcttcagcgagccgcgcggcagccgcagcggattcggcgcgctgctgctcggcgtgcac
gagcggcccgcgcaagggcgtcgccgtgccggcggcctggcttatgtcggccgcgtcggc
accgggttcgatcggcgcgcgctcgacgcgatcgcggccaggctgcgaaagatcgaacgc
ggcgacgcgccgttcgcggtgccgccggccgaacgcggcgacgcggtgcactgggtcgag
ccgcggctggtggccgaatgcgagttcgcgggctggaccgccgacggcctggtccggcag
gctgccttcatcggcttgcgcgaggacaagccggccgggcagatcgtcagggaaacggcc
gcgcccgccggcgggcaaccgacaggaggcaggatgaggaccgatcatcaggcgacgggc
tcgcgctcgcgcggcaaggccgcgaaccacgccaccggcaggaacgacgacgccacggtg
gcgggtgtgcgcgtcacgcatcccgagcgcgtggtcgataccgagagcggcctgcgcaag
atcgacgtggtccgctattacgccgcgatcgccgagcacctgctgccgcagctcgcggga
cggccggtttcgctggtgcgctacatgaagggcatcgacgggccgtctttcttccagaag
cacgcgggcccgcgcggcatgggtttcgtcacgcgccaccccggcctcgatcccgggcac
gacgcgctgatcacgctcgacgatcgcgaggccctggtcggcgccgcgcagttcgacgcc
ctcgaattccacacctggaatgcctgcgtggaccggatcgagcggcccgaccggctggtg
ttcgacctcgatcccgacccggccttgccgtggcgcgcgatgatcgaggcggcccaggcg
ctgcgcgcgctgctcgacgcgctggggctgccgtgcttctgcaagaccagcggcggcaag
ggcctgcacctggtggtgccgatcacgcgccacgcttcctgggaccaggcgcgcgatttc
tcgcaggcggtggcgcagcacctggccggcgtcgcgccggagcgtttctcggcgaagatg
ggcgcgcagaaccgcaagggccgcatcttcgtcgactacctgcgcaacgggcgcggcgcc
agcacggtggcggcctggtcggcgcgggcgcggccggggatgggcgtgtcggtgccgatc
gattgggatgagctgcccggtacccgcggcggcgcgcaatggaccatcgccgaggtgccg
cagcggctggcctcgctgcggcgcgatccctgggacggctacgaggcggcgcgccggcgg
ctcaccgcggccatgcgcgagcgcctgggcaagctctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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