KEGG   Burkholderia sp. CCGE1002: BC1002_0314Help
Entry
BC1002_0314       CDS       T01217                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
bge  Burkholderia sp. CCGE1002
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:bge00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    BC1002_0314
Enzymes [BR:bge01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     BC1002_0314
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     BC1002_0314
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
1:338575..339405
Genome map
AA seq 276 aa AA seqDB search
MPELPEVEVTRRGIEPYVSGRKVERVDVRTATLRWPIPADLAKTLRGHVVRKVERRGKYL
LFEIDAGWFIVHLGMTGTLRVLRHVPHPPAAAKHDHVDWIFDDFILRYRDPRRFGAVLWH
PREEGDILEHPLLASLGVEPFSPAFSGAQMHRLTRGRKVSVKQALLAGDIVVGVGNIYAS
ESLFRAGIRPTTAAGRVSLVRYELLADAVRVTLAAAIDKGGSTLRDFVGSNGESGYFQLD
YFVYDRAGLPCRVCGTPIKQIVQGQRSTYFCPTCQR
NT seq 831 nt NT seq  +upstreamnt  +downstreamnt
atgccagagttgccagaagtcgaggttacccgacgagggatcgaaccgtatgtgtccggg
cgcaaggttgagcgcgtcgacgtgcggacggccacgttgcgctggccaattccggccgac
cttgcgaaaaccttgcgtggccatgtggtgcgcaaagtcgagcgacgcggcaagtatctg
ctgttcgaaatcgacgcagggtggttcatcgtgcacctcggcatgacgggcacgttgcgc
gttctgcgtcatgtgccgcatccgccggccgcggcgaagcacgatcatgtcgactggatc
ttcgacgacttcatcttgcgctatcgtgatccgcgccgcttcggcgcggtgctgtggcat
ccccgtgaagaaggcgacatcctcgaacatccgctgctcgcgagccttggcgtcgagcct
ttctcgccggcgttttcgggcgcgcagatgcatcggttgacgcgcgggcgcaaggtgtcg
gtgaagcaggctttgctggcgggcgacatcgtggtcggcgtgggcaatatctacgcgtcg
gagagtctctttcgcgcgggcatccggcccaccaccgcggcgggccgggtgtcgctcgtg
cgttatgagctgctcgccgatgccgtgcgtgtgacgctcgccgccgcgatcgacaaaggc
ggcagcacgctgcgcgatttcgtcggcagcaacggcgaaagcggctatttccagctcgac
tacttcgtctatgatcgggcgggcctgccatgccgcgtgtgtggaacgccaatcaaacag
atcgtgcagggacaacgctccacgtacttctgtcccacttgccagcgctag

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