KEGG   Paraburkholderia atlantica CCGE1002: BC1002_1797
Entry
BC1002_1797       CDS       T01217                                 
Name
(GenBank) phage SPO1 DNA polymerase-related protein
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
bge  Paraburkholderia atlantica CCGE1002
Pathway
bge03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bge00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BC1002_1797
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bge03400]
    BC1002_1797
Enzymes [BR:bge01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     BC1002_1797
DNA repair and recombination proteins [BR:bge03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BC1002_1797
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ADG15861
UniProt: D5W8W6
Position
1:complement(2007154..2008152)
AA seq 332 aa
MALHESVLEEFGLAPLWVRRGLAARQAEAGQGDASQSLRADADADADDERRVEAAPQAAR
EPQRVSADVQPPQAPHESAPRFDETAARRETSQPQPDFSAPPAFDAPLDDDFAWFDDPTA
STPAPAEARRAAPALPAVHTLDWDALAERVAGCEACRLCEKRTNTVFGVGDREADWMLIG
EAPGENEDRQGEPFVGQAGKLLDNMLHSLALARGTNVYIANVIKCRPPGNRNPQPDEVAR
CEPYLQRQVSLVKPKLIVALGRFAAQSLLKTDASISSLRGRVHTYEGVPVIVTYHPAYLL
RSLPDKAKAWTDLCLARATWLANAGAPSNESK
NT seq 999 nt   +upstreamnt  +downstreamnt
atggcgctgcatgaatcggtgcttgaagaattcggactcgcgccgttgtgggtgcgtcgc
ggactcgcggcgcggcaggcggaggccgggcagggcgatgcatcgcagtcgctgcgggcg
gacgcggacgcagacgcagacgacgagcgtcgcgtcgaggctgcgcctcaggccgcgcgc
gaacctcagcgcgtatccgccgacgtgcaaccgccgcaagcgccgcatgaatccgcaccg
cgcttcgacgaaaccgccgcgcgccgcgagacatcacaaccgcaaccggacttttcggcc
ccgccggctttcgacgccccactcgacgacgacttcgcgtggttcgacgacccaaccgca
tcgacccccgcacctgccgaagcgcgccgcgccgcgcccgcactgccggctgtccacacg
ctcgactgggacgcgctcgccgagcgcgtcgccggatgcgaggcctgccgcctgtgcgag
aagcgcaccaacacggtgttcggcgtcggcgatcgcgaggccgactggatgttgatcggt
gaagcgcccggcgagaacgaggaccgtcaaggcgaacctttcgtcggtcaagccggcaag
ctgctcgacaacatgctgcattcgctcgcgctcgcgcgcggcaccaacgtgtatatcgcg
aacgtgatcaagtgccggccgcccggcaaccgcaatccgcagccggacgaggtcgcgcgt
tgcgaaccttatctgcagcgtcaggtatcgctcgtgaagccgaagctgatcgtcgcgctc
ggccgtttcgccgcgcaaagtctgctgaagaccgacgcgagcatttcgtcgctgcgcggc
cgcgtgcatacgtacgagggtgtgccggtgatcgtcacttatcacccggcctatctgctg
cgtagcctgcccgacaaggccaaggcgtggacggacctgtgcctcgcgcgtgccacgtgg
ctcgcgaacgccggcgcgccgtcgaacgaatcaaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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