KEGG   Alkalicoccobacillus gibsonii: BGM20_07780
Entry
BGM20_07780       CDS       T04820                                 
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
bgi  Alkalicoccobacillus gibsonii
Pathway
bgi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bgi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BGM20_07780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bgi03400]
    BGM20_07780
Enzymes [BR:bgi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BGM20_07780
DNA repair and recombination proteins [BR:bgi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BGM20_07780
    RecFOR pathway proteins
     BGM20_07780
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 TIP49 Mg_chelatase DUF815 AAA_16 nSTAND3 AAA_22 Rad17 NB-ARC AAA_3 TsaE AAA_2 NTPase_1 AAA_14 Resolvase AAA_18 RNA_helicase AAA_24 Sigma54_activ_2 AAA_25 AAA_17 AAA_28 Bac_DnaA IstB_IS21 NACHT
Other DBs
NCBI-ProteinID: AOL30536
Position
complement(1492052..1493056)
AA seq 334 aa
MDERLVSSEADNHESVIEQSLRPQNLAQYIGQHKVKENLRVFIDAAKMRQETLDHVLLYG
PPGLGKTTLASIVANEMGVELRTTSGPAIERPGDLAAILTALEPGDVLFIDEIHRLHRSI
EEVLYPAMEDFCLDIVIGKGPSARSVRLDLPPFTLVGATTRVGLLTAPLRDRFGVMSRLE
YYTQEELADIVTRTADVFEVEIDKPSALEIARRSRGTPRVANRLLRRVRDFAQVLGDSRI
TEDISQNALERLQVDRLGLDHIDHKLLMGMIEKFNGGPVGLDTISATIGEESHTIEDVYE
PYLLQIGFIQRTPRGRIVTPAVYHHFQMEAPRYD
NT seq 1005 nt   +upstreamnt  +downstreamnt
atggatgaacggctcgtctcaagtgaagcagacaaccatgaatcagtgatagagcaaagc
ctgaggccgcaaaacctggcacagtatatcgggcagcataaggtaaaagaaaatttacgc
gtgtttatagatgcggcgaaaatgagacaggagacgctggatcatgttcttctgtacggg
ccgcccggactcggaaaaacaacgcttgcttcgattgttgctaatgaaatgggagtggaa
ttgcggacgacctcagggcctgcgattgaaaggcctggtgatttggctgctatattaacg
gcgctggaaccgggagatgtattatttattgatgaaatacataggctgcacagatcgatc
gaagaggtgctttatcctgcaatggaagacttttgcctggacattgtgattggcaaaggc
ccatctgcccgctcggttcggctcgaccttccgccttttacgctggtgggagccacgacg
agggtggggcttttgacggctcctttaagagacagattcggcgtaatgtctcgccttgag
tactatacacaagaagaactggcggatattgtcacaagaaccgctgatgtattcgaggtt
gagattgataaaccgtcggctcttgaaattgcaagaagatcgagagggacgccccgcgtg
gcgaaccgcctgctgagaagggtgcgcgattttgcccaagtgctgggtgacagcaggatt
acggaagacatttctcagaatgcgctggagcggcttcaggttgaccgtctcggtttggat
catattgatcataagctgctgatgggcatgatcgaaaaattcaacggcggcccagtaggc
cttgatacgatttcagctaccatcggcgaggaatcgcatacgattgaagacgtatatgaa
ccatatctgctgcaaattggatttatacaaagaacgccgcgtggaaggatcgtgacaccg
gccgtttatcatcatttccaaatggaggctccccgatatgactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (29)   
   Pfam (29)   
All databases (38)   

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