KEGG   Burkholderia plantarii PG1: BGL_2c02430
Entry
BGL_2c02430       CDS       T03632                                 
Symbol
lpdA
Name
(GenBank) 2-oxoisovalerate dehydrogenase, E3 component, dihydrolipoamide dehydrogenase LpdA
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
bgp  Burkholderia plantarii PG1
Pathway
bgp00010  Glycolysis / Gluconeogenesis
bgp00020  Citrate cycle (TCA cycle)
bgp00260  Glycine, serine and threonine metabolism
bgp00280  Valine, leucine and isoleucine degradation
bgp00310  Lysine degradation
bgp00380  Tryptophan metabolism
bgp00620  Pyruvate metabolism
bgp00630  Glyoxylate and dicarboxylate metabolism
bgp00640  Propanoate metabolism
bgp00785  Lipoic acid metabolism
bgp01100  Metabolic pathways
bgp01110  Biosynthesis of secondary metabolites
bgp01120  Microbial metabolism in diverse environments
bgp01200  Carbon metabolism
bgp01210  2-Oxocarboxylic acid metabolism
bgp01240  Biosynthesis of cofactors
Module
bgp_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bgp_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bgp_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
bgp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
bgp_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:bgp00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    BGL_2c02430 (lpdA)
   00020 Citrate cycle (TCA cycle)
    BGL_2c02430 (lpdA)
   00620 Pyruvate metabolism
    BGL_2c02430 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    BGL_2c02430 (lpdA)
   00640 Propanoate metabolism
    BGL_2c02430 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BGL_2c02430 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    BGL_2c02430 (lpdA)
   00310 Lysine degradation
    BGL_2c02430 (lpdA)
   00380 Tryptophan metabolism
    BGL_2c02430 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    BGL_2c02430 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bgp04147]
    BGL_2c02430 (lpdA)
Enzymes [BR:bgp01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     BGL_2c02430 (lpdA)
Exosome [BR:bgp04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   BGL_2c02430 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 NAD_binding_8 GIDA DAO FAD_binding_2 HI0933_like FAD_oxidored FAD_binding_3 UDPG_MGDP_dh_N XdhC_C AlaDh_PNT_C 3HCDH_N Thi4 Lys_Orn_oxgnase
Other DBs
NCBI-ProteinID: AJK48339
UniProt: A0A0B6S1V9
Position
2:285538..286935
AA seq 465 aa
MNEPITTTLLIVGAGPGGYVAAIRAAQLGVPTVVVERAQPGGTCLNIGCIPSKALIHAAD
EFDKARHYNGDSPLGIRVASPEIDIARTVAWKDGIVGKLTGSVATLLKRHGVELVRGDAR
VIDGKTVEVAREAAGPVRIRCEHLLLAAGSEPVALPSMPFGGIVQSSTEALSPATLPRRL
VVVGAGYIGLELAIAYRKLGAEVSVVEAQERILPIYDAALTKPVAAALARLGITLQLGRK
VLGLSPAGDAVRVQDAAGAETALPADRVLVAVGRRPRTQGWGLEALQLDRAGHALKVDDQ
CRTSMRNVWAIGDLAGEPMLAHRAMAQGEMVAEIVSGKRRRFMPAAIPAICFTDPEVVSV
GLAPHDAAAPDDALAASFPLVANGRAMTIEGTDGFVRVVARRDDHRILGWQAVGRGVSEL
AAAFSQSLEMGARLEDVGGTIHAHPTLGEAVQEAALRALGHALHV
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgaacgaaccgattacaaccacgctgctcatcgtcggcgccggcccgggcggctacgtc
gccgcgatccgcgccgcgcagctgggcgtgcccaccgtggtggtggagcgcgcgcagccg
ggcggcacctgcctgaacatcggctgcatcccgtccaaggcgctgatccacgcggccgac
gagttcgacaaggcccgccactacaacggcgactcgccgctcggcatccgcgtggcctcg
cccgagatcgacatcgcgcgcaccgtcgcctggaaggacggcatcgtcgggaaactgacc
ggcagcgtggccacgctgctcaagcgccacggcgtcgagctggtgcgcggcgacgcgcgc
gtgatcgacggcaagaccgtggaagtcgcgcgcgaagccgccggcccggtgcggatccgc
tgcgagcacctgctgctcgcggccggctccgagccggtcgcgctgccgtcgatgccgttc
ggcggcatcgtgcagtcgtccaccgaggcgctctcgcccgccacgctgccgcgccggctg
gtggtggtgggcgccggctacatcgggctcgagctggcgatcgcctaccgcaagctcggc
gccgaggtgagcgtggtcgaagcgcaggagcgcatcctgccgatctacgacgcggcgctg
accaagccggtggccgccgcgctcgcgcggctcggcatcacgctgcagctgggccgcaag
gtgctgggcctgagcccggccggcgacgcggtgcgcgtgcaggatgccgccggcgccgag
acggcgctgccggccgaccgcgtgctggtggcggtggggcgccggccgcgcacccagggc
tgggggctcgaggcgctgcagctcgatcgcgccggccacgcgctgaaggtcgacgaccag
tgccggacctcgatgcgcaacgtctgggcgatcggcgacctggcgggcgagccgatgctc
gcgcatcgcgcgatggcgcagggcgagatggtggccgagatcgtctcgggcaagcggcgg
cgcttcatgccggccgcgatcccggcgatctgcttcaccgatcccgaggtggtgtcggtg
gggctcgcgccgcacgacgccgccgcgcccgacgacgcgctggcggccagcttcccgctg
gtagccaacggccgcgcgatgacgatcgagggcaccgacggcttcgtgcgcgtggtggca
cggcgtgacgatcaccggatcctcggctggcaggcggtcggccgcggcgtgtccgaactc
gcggcggcgttctcgcagtcgctcgagatgggcgcgcggctcgaggacgtgggcggcacc
atccacgcgcatccgacgctcggcgaggcggtgcaggaagcggcgctgcgcgcgctcggt
cacgcgctgcatgtctga

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