KEGG T03820: KS03

Burkholderia glumae LMG 2196 = ATCC 33617: KS03_3180

Entry

KS03_3180         CDS       T03820

Name

(GenBank) hhH-GPD superbase excision DNA repair family protein

K01247

DNA-3-methyladenine glycosylase II [EC:3.2.2.21]

Organism

bgu Burkholderia glumae LMG 2196 = ATCC 33617

Pathway

bgu03410

Base excision repair

Brite

KEGG Orthology (KO) [BR:bgu00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    KS03_3180
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bgu03400]
    KS03_3180
Enzymes [BR:bgu01000]
3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     KS03_3180
DNA repair and recombination proteins [BR:bgu03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     KS03_3180

SSDB

Motif

Pfam:

HhH-GPD

Other DBs

NCBI-ProteinID:

AJY65673

Position

I:complement(3481968..3482879)

AA seq 303 aa
MATGRKVPAKRAARTATGASAAAKRVPASKVAAKRAAGPAEGANGAAHKPLARGAAKPAR
ADAAERRELAVDAADSGARRARAAEAAVPVQLADADVVVRPPYWDKACADLVKRDRILKK
LIPKFGPAHLVKRGDPFVTLARSVVGQQISVATAQAVWAAIEAACPKLTPQQVIRLGQEK
LAACGLSKRKSDYILDLAQHFVSGALHVDKWTSMEDEAVIAELTQIRGIGRWTAEMFLIF
NLSRPDVLPLDDLGLIRAISINYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDPES
GDA

NT seq 912 nt +upstreamnt +downstreamnt
atggcaacgggcaggaaagtgccggcaaagcgggcggcgcgcacggcgacgggcgcgtcg
gcggccgcgaagcgcgtgccggccagcaaggtcgccgcaaagcgtgcggccggccccgcc
gagggcgccaacggcgccgcgcacaagccgctcgcgcgcggcgcggcgaagcccgcgcgc
gccgacgcggccgagcgtcgcgaactggcggtcgacgccgccgacagcggcgcgcggcgc
gcgcgcgcggccgaggcggccgtgccggtgcagcttgccgatgcggacgtggtggtgcgc
ccgccctactgggacaaggcgtgcgccgatctcgtcaagcgcgaccggattctcaagaag
ctgatccccaagttcggtcccgcgcatctcgtcaagcgcggcgatccgttcgtcacgctc
gcacgctcggtggtcggccagcagatctcggtcgccacggcgcaggccgtttgggccgcg
atcgaggccgcgtgcccgaagctcacgccgcagcaggtgatccgcctcggccaggagaag
ctcgccgcctgcggcctgtcgaagcgcaagtccgattacattctcgatcttgcccagcat
ttcgtgtcgggcgcgctgcacgtcgacaaatggacctcgatggaagacgaggccgtgatc
gccgagctcacgcagatccgcggcatcggccgttggaccgccgagatgttcctgatcttc
aatctgtcgcgcccggacgtcctgccgctcgacgacctcggcctgattcgcgcgatcagc
atcaactacttcagcggcgagcccgtcacgcgcagcgaggcgcgcgaggtcgcggcgaac
tgggagccgtggcgtacagtcgcgacctggtacatgtggcgcagcctggatcccgaatcc
ggtgatgcgtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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