KEGG   Bacillus glycinifermentans: BGLY_1873
Entry
BGLY_1873         CDS       T04537                                 
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
bgy  Bacillus glycinifermentans
Pathway
bgy03030  DNA replication
bgy03430  Mismatch repair
bgy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bgy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BGLY_1873 (polC)
   03430 Mismatch repair
    BGLY_1873 (polC)
   03440 Homologous recombination
    BGLY_1873 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bgy03032]
    BGLY_1873 (polC)
   03400 DNA repair and recombination proteins [BR:bgy03400]
    BGLY_1873 (polC)
Enzymes [BR:bgy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BGLY_1873 (polC)
DNA replication proteins [BR:bgy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BGLY_1873 (polC)
DNA repair and recombination proteins [BR:bgy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BGLY_1873 (polC)
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_a_NII DNA_pol3_finger DNA_pol3_a_NI HHH_6 tRNA_anti-codon HHH_3 RNase_H_2 Rv2179c-like DEDDh_C
Other DBs
NCBI-ProteinID: SCA85696
UniProt: A0A1C3SCX7
Position
1:1854433..1858749
AA seq 1438 aa
MEDQLSVNRRQFQILLQQLNFTEDTVIRHLEGGQIIKLTVHKNKKTWHFHFQFKAVLPYQ
VFERFHHQLTRTFSHIAQVTCSIEAEDRTVDERLIQDYWTRCIQELDGISPPILTLLNEQ
KPKLSGNKLVLKTKTDTEASALKKKYASLIQASYRTFGFPELQLETEIFVSDQEIQKFRE
QKLAEDKERALQALIEMEKQDKESAEDEAPQGPLQIGYPIKDTEEIRTLDSIMDEERRIT
VQGYVFDAETRELKSGRTLCIFKITDYTNSILIKMFAREKEDANLMKSLKKGMWVKARGS
IQNDTFVRDLVMIANDVNEIKAKTREDTAPDDEKRVELHLHSPMSQMDAVTSIGKLVEQA
KKWNHSAIAITDHAVVQSFPDAYAASKKHGVKMIYGLEANLVDDGVPIAYNPAHRLLEEE
TYVVFDVETTGLSAVYDTIIELAAVKVKGGEIIERFERFANPHRPLSATIIELTGITDDM
LKDAPDVEEVIRDFKEWIGDHTLVAHNASFDMGFINVAYKRLLKTEKAQNPVIDTLELGR
FLYPEFKNHRLNTLCKKFDIELTQHHRAIYDTEATGYLLVKMLKDAAEKNILYHDQLNEN
MGQSNAYQRSRPYHATLLAVNETGLKNLFKLVSLSHINYFYRVPRIPRSQLEKHREGLLV
GSACDKGEVFEGMMQKSPEEVEEIASFYDYLEVMPPEVYRHLLELELVRDEKSLKEIITN
ITKLGDKLNIPVVATGNVHYLNPEDKIYRKILISSQGGANPLNRHELPNVHFRSTDEMLE
AFSFLDKEKAKEIVVTNTRMISEKIEEIKPIKDDLYTPKIEGADEEIRNMSYEKAKSIYG
ENLPEIVEKRIEKELKSIIGHGFAVIYLISHKLVKRSLDDGYLVGSRGSVGSSLVATLTE
ITEVNPLPPHYVCPDCCHSEFFNDGSVGSGFDLPDKDCPKCGAVYKKDGHDIPFETFLGF
KGDKVPDIDLNFSGEYQPRAHNYTKVLFGEDNVYRAGTIGTVAEKTAYGYVKGYANDNNL
HIRGAEIDRLVQGCTGVKRTTGQHPGGIIVVPDYMDIYDFSPIQFPADATDSEWKTTHFD
FHSIHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFQGPESLGVTEEQI
GCKTGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNNICEL
SEVIGCRDDIMVYLIYQGLEPSLAFKIMEFVRKGKGLTPEWEEEMRNNNVPEWYIDSCKK
IKYMFPKAHATAYVLMAVRIAYFKVHHPLLYYAAYFTVRADDFDIDTMIKGSTAIRAVMD
DINSKGLDASPKEKSLLTVLELALEMCERGFSFQKVDLYRSSASEFIIDGNSLIPPFNSI
PGLGTNAALNIVKAREEGEFLSKEDLQKRGKVSKTLMEYLERHGCLESLPEQNQLSLF
NT seq 4317 nt   +upstreamnt  +downstreamnt
ttggaagaccagctttctgtcaacagaagacagtttcaaattcttctgcagcagctgaat
tttaccgaagatacagtaatccgccatcttgaaggcgggcagatcatcaagcttaccgtt
cataaaaacaagaagacctggcatttccactttcaatttaaagccgtgctgccgtatcag
gttttcgaacggtttcatcaccagctgacacgcaccttttcccatattgcacaagtgaca
tgctcaatcgaagccgaagaccggacggtggacgagcggctcatccaggactactggacg
cgctgcattcaagaattagacggcatttctccgccgattttaacgcttttgaatgagcaa
aagcctaaactttcagggaacaaactcgtactgaaaacgaaaacagatacagaagcttcg
gcactgaagaaaaaatacgcttcactcattcaggcaagctaccggacgttcgggtttccc
gagcttcagctcgagactgaaattttcgtatcagatcaagagattcagaaattcagagaa
caaaagctggctgaagacaaggaacgcgcccttcaggccttaatcgaaatggaaaagcag
gataaagaaagcgctgaagatgaggcgccgcaagggccgctgcaaatcggctatccgatc
aaagacacggaagaaatcaggacgcttgacagcatcatggatgaagagcggagaattacg
gttcaagggtatgtgtttgatgctgaaacaagggagctcaagagcggcagaacgctttgc
atctttaaaatcacagattatacgaacagcatcctcatcaaaatgttcgcccgcgagaaa
gaggacgcaaacctgatgaaatccttgaaaaaagggatgtgggtcaaggcgcggggaagc
attcaaaacgacacgttcgtccgcgatttagttatgatcgccaacgatgtaaatgaaatc
aaagcgaaaacgcgcgaagataccgcaccggatgacgaaaaacgggttgaacttcacctt
cattcgccgatgagccaaatggatgccgttacaagcatcggcaagcttgtcgaacaggcg
aaaaaatggaaccattccgccatcgcaattacggatcacgccgtcgtacagtcgtttccg
gatgcgtatgcggcaagcaaaaaacacggcgtgaaaatgatctacggccttgaagcgaat
ctcgtagatgacggcgtgccgatcgcttacaaccccgcgcaccgtcttttagaagaggaa
acctatgtcgtatttgacgtcgaaacgacggggctgtccgcggtatacgatacgatcatc
gaattggccgctgtaaaagtaaaaggcggggaaatcatcgagcgttttgaaaggtttgct
aacccgcatcgtcctttatcagctaccatcattgagctgacgggaattacggacgatatg
ctcaaagacgcaccagatgttgaagaagtgatcagggattttaaggaatggatcggagac
cacacgcttgtcgcccacaatgcgagttttgacatggggttcatcaatgtcgcctataag
cggcttctgaaaaccgaaaaagcgcaaaaccctgtcatcgatacgctggaacttggacgt
tttctctaccctgagttcaaaaaccacagactgaatacgctctgtaaaaagttcgatatc
gagctcacgcagcaccacagggcgatttatgatacggaagcgacgggctatctcctcgtg
aaaatgcttaaagacgcggctgaaaaaaatattttgtatcatgaccagctcaatgaaaac
atggggcagtcgaatgcgtatcagcgctcaagaccttatcatgcgacacttttggcggta
aacgaaacaggcttaaaaaacctgttcaaactcgtttcactttcacacatcaactatttt
tacagggtgccgagaattccgcggtcacagctggaaaagcacagagaaggcctgttagtc
ggctcggcgtgcgacaaaggcgaagtatttgaaggcatgatgcagaaatcgccggaagag
gtcgaggagatcgcttcgttctatgactatcttgaagtgatgccgcctgaagtctaccgc
catctgctcgagcttgagctggtcagggatgaaaaatcgctcaaggaaatcattacaaac
atcacaaagcttggggacaagctgaacatacccgtcgtggcaacaggaaatgtgcattac
ttaaatccggaggacaaaatctacagaaagattttgatttcctcgcagggcggggcaaat
ccgctgaacaggcatgagctgccgaacgttcatttccgttcgacggatgaaatgcttgaa
gccttttcattcttggacaaggaaaaagcgaaagaaatcgttgtgacgaatacgcggatg
atcagcgaaaaaatcgaagaaatcaaaccgatcaaagacgatctctatacgccgaagatc
gaaggggcagatgaagaaatccgcaacatgagctatgaaaaagcgaaaagcatttacggc
gaaaatttgcccgagattgtggagaagcgtatcgaaaaagagctgaaaagcattatcggc
cacggatttgccgttatttatctgatttcccacaagctcgtaaaacgctctcttgatgac
ggttatctcgtcggctcaaggggatcggtcggttcttcactcgttgcgacattgactgaa
attaccgaggttaatccgctgcctccgcactacgtctgtcctgattgctgccattcggaa
tttttcaatgacggatctgtcggctcgggattcgacttgcctgacaaagactgtccgaaa
tgcggggccgtctataaaaaagacgggcacgatattccgttcgaaacgttcctgggcttt
aaaggggacaaggttccggatatcgatttgaacttctccggggaatatcagccccgcgcc
cacaattacacgaaagtgctgttcggggaagataacgtctaccgcgcgggaacgatcggc
acggttgccgaaaaaacggcttacggatatgtcaaagggtatgcgaacgataacaatctg
catatacgcggggcggaaatcgaccgccttgtgcaggggtgcaccggcgttaagcggacg
acgggccagcacccgggcggaatcatcgtcgttccggactatatggatatttacgatttt
tcaccgatccagtttccggcagatgccaccgattcagaatggaaaacgacccacttcgac
ttccattcgattcacgacaatctgctgaagcttgatattcttggacacgatgatccgacg
gtgatccgcatgcttcaggatttaagcggaatcgatccgaagacgattccgaccgatgat
ccggaagtcatgaaaatcttccaggggcctgagtctttaggcgtcacagaagagcagatc
ggctgtaaaaccggtacgctcggaatccctgaattcggaacccgtttcgtcagacagatg
cttgaggatacaaagcctacgacattttccgagctcgtccagatttccggactttctcac
ggcacggacgtctggctcgggaacgcacaggagctcattcataataatatatgcgagctg
agcgaggttatcggatgccgcgacgatattatggtgtatctcatctatcagggccttgaa
ccttccctggcctttaaaattatggagtttgtccggaaagggaaaggcttgacaccggag
tgggaagaagaaatgaggaataataatgttcccgagtggtacatcgattcatgcaagaaa
atcaaatacatgttcccgaaagcccacgccaccgcctatgtgctgatggccgtccggatc
gcatattttaaagtgcaccaccctctgctttattacgcggcatactttacggtccgcgcc
gatgatttcgatatcgatacgatgatcaaaggctcgaccgcgatcagagccgtcatggat
gacatcaacagcaaggggcttgacgcttctccgaaagagaaaagcttgcttaccgtgctt
gagctggcgcttgaaatgtgtgaaaggggattttctttccaaaaggtggatttatacagg
tcaagcgcctcagaatttattattgacggcaacagcctgatccctcctttcaactccatt
ccgggccttggtacaaacgccgctttaaatattgtcaaggcaagggaggaaggcgaattt
ctttcaaaagaagatttgcaaaaaaggggaaaggtttcgaaaacccttatggaatacttg
gagcggcacggctgcttagagtcgcttccggaacagaatcagctttctttattctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (25)   

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