KEGG T00039: BH0006

Halalkalibacterium halodurans: BH0006

Entry

BH0006            CDS       T00039

Symbol

gyrB

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

bha Halalkalibacterium halodurans

Brite

KEGG Orthology (KO) [BR:bha00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bha03032]
    BH0006 (gyrB)
   03400 DNA repair and recombination proteins [BR:bha03400]
    BH0006 (gyrB)
Enzymes [BR:bha01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BH0006 (gyrB)
DNA replication proteins [BR:bha03032]
Prokaryotic type
  DNA Topoisomerases
   BH0006 (gyrB)
DNA repair and recombination proteins [BR:bha03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BH0006 (gyrB)

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 HAP1_N

Other DBs

NCBI-ProteinID:

BAB03725

UniProt:

O50627

Position

5130..7043

AA seq 637 aa
MTREQQAYDESQIQVLEGLEAVRKRPGMYIGSTSSRGLHHLVWEIVDNSIDEAMAGFCDE
IGVVIEEDNSITVTDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGGLHGV
GASVVNALSTMLEVEVHREGKVHYQKFHRGVPAADLEVIGTTDRTGTKIHFKPDGDIFTE
TTVFEYDTLASRLRELAFLNKGLRIKITDMREEEKSDEFHYEGGIASFVEHLNRTRETLH
ETPIHIEGEKQGVYVEIAVQYNDGFTSNIYSFANNINTHEGGTHESGFKTGLTRVINDYA
RKHNLFKESDPNLTGEDVREGLTAIISVKIPDPQFEGQTKTKLGNSEARTITDSLFTEHF
SRFLIEHPQVARKLVDKGLMASRAREAAKKARELTRRKSALEVSSLPGKLADCSSRDASI
SEIYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILANNEIRAIITALGTG
IGDDFDIEKARYHKIIIMTDADVDGAHIRTLILTFFYRYMRPLIEHGYVYIAQPPLYKVQ
QGKDIQYAYGDAELQEILSQLPDKAKPGIQRYKGLGEMNPSQLWETTMDPGQRTVLQVTL
EDAMKADEIFEILMGDRVEPRRDFIQENARYVKNLDI

NT seq 1914 nt +upstreamnt +downstreamnt
gtgacgagggaacaacaagcatacgatgaaagtcaaatacaggtccttgaaggactggag
gccgttcgaaaacgtccagggatgtatatcggatcgacgagcagccgcggacttcatcat
ttagtttgggaaattgtcgacaacagcattgacgaagcgatggctggcttttgtgatgag
atcggggttgtaatcgaagaggataatagcattacagttaccgacaatggtcgaggcatt
cctgttgggattcatgaaaagatggggcgtccggctgtcgaggtcattatgaccgttctc
catgcaggagggaagttcggcggcggtggttataaagtatctggtggtttgcacggtgta
ggtgcatccgtcgtaaatgctttatcgacgatgctggaagtagaagttcaccgtgaaggg
aaagtccactatcaaaaatttcatcgcggtgtacctgctgctgatttagaagtcattggc
acgaccgatcgaacaggcacgaaaatccactttaaaccagacggtgacatttttacggaa
acaacggttttcgaatatgatactctcgcatcacggttgcgtgaattggcctttttaaat
aaaggattgcgcattaagattaccgatatgcgtgaggaagaaaagtcggacgaatttcac
tatgagggcgggatcgcttcatttgtggagcatttaaaccgcacgcgtgagactttgcac
gaaacgccgatccatatcgaaggagagaagcaaggcgtttacgtagagatcgccgtccaa
tataacgatggattcacgagcaatatttactcgtttgctaataatatcaacacccatgaa
gggggaacgcacgagtcagggtttaaaacaggtcttactcgtgtcattaacgattatgct
cgcaagcataatttgttcaaagaaagcgatccgaacttaacgggggaagatgtacgtgaa
ggattaaccgccattatctcggtaaaaattcctgatcctcagtttgaagggcaaacgaaa
acgaagctaggaaatagcgaagcacgtacgatcactgattcccttttcacagagcatttt
tcccggtttctgatcgaacatccgcaagtggcacgtaagctagttgacaaaggactcatg
gcttcaagggctagggaagcagcgaaaaaagcacgtgagcttacgcggagaaagagcgct
cttgaggtaagctctctcccaggaaaactagcagactgttcgtcacgcgacgcttcgatt
agtgagatttacattgtggagggggactctgctggcggatcggccaaacaaggccgtgat
cggcatttccaagcgattctcccattgcgcgggaaaatcttaaatgtagagaaggctcga
ttagataaaatattagcgaacaatgaaattcgcgcgatcattaccgcccttggaacagga
attggtgatgatttcgacattgaaaaggctcgttaccataaaattattatcatgacagac
gccgatgtggatggagcgcacattcgcacgttgattttaacgttcttctatcgctacatg
aggccgttaattgaacacggatacgtctatattgcgcagccaccgttatacaaggtacaa
caagggaaagacattcagtatgcgtacggtgatgcagagcttcaggaaatcttaagtcag
cttccagataaggcgaagccaggaatccagcggtataaaggtcttggtgagatgaatcca
tcacagctttgggaaacaacgatggacccaggccaacgtaccgtcttacaagtaacgtta
gaagatgctatgaaggctgatgaaattttcgaaatcttaatgggtgaccgcgtcgagcca
cgtcgtgattttattcaagagaatgcccgctatgtgaaaaatctcgacatttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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