KEGG B.halodurans: BH0126

Bacillus halodurans: BH0126

Entry

BH0126 CDS B.halodurans

Gene name rpoB

Definition DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)

Orthology K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]

Pathway bha00230 Purine metabolism
bha00240 Pyrimidine metabolism
bha01100 Metabolic pathways
bha03020 RNA polymerase

Class Metabolism; Nucleotide Metabolism; Purine metabolism [PATH:bha00230]
Metabolism; Nucleotide Metabolism; Pyrimidine metabolism
[PATH:bha00240]
Genetic Information Processing; Transcription; RNA polymerase
[PATH:bha03020]
Genetic Information Processing; Replication and Repair; DNA repair
and recombination proteins

SSDB

Motif Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_2 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7
RNA_pol_Rpb2_3 RNA_pol_Rpb2_45
PROSITE: RNA_POL_BETA

Other DBs NCBI-GI: 15612689
NCBI-GeneID: 892766
UniProt: Q9Z9M2

Position 155663..159205

AA seq 1180 aa
MTGQLIQYGRHRQRRSYARINEVLELPNLIEIQTASYQWFLDEGLREMFQDISPIQDFTG
NLVLEFIDYSLGEPKYPVDESKERDVTYAAPLRVKVRLINKETGEVKEQEVFMGDFPLMT
DTGTFIINGAERVIVSQLVRSPSVYYSEKIDKNGKKGYTATVIPNRGAWLELETDAKDIV
YVRIDRTRKIPVTVLLRALGFGSDQEIIDLLGEDEYLRNTLEKDNTDSAEKALLEIYERL
RPGEPPTVENAKSLLDSRFFDPKRYDLANVGRYKVNKKLHIKNRLFNQRLAETLIDPETG
EVIAEEGSIIDRRTLDRILPYLENNVGFRTVRMSGGVVEEDEVRLQSVKIYAPDDQDGEH
VIRVIGNGLVEKEIKHITPADIIASINYFFNLLHSVGGTDDIDHLGNRRLRSVGELLQNQ
FRIGLSRMERVVRERMSIQDPNSITPQALINIRPVIASIKEFFGSSQLSQFMDQTNPLAE
LTHKRRLSALGPGGLTRERAGFEVRDVHYSHYGRMCPIETPEGPNIGLINSLSTYAKVNE
FGFMETPYRRVDPETGKVTAQIDYLTADEEDNYVVAQANMKLAEDGSFIDENIIARFRGE
NIVVSRDRVDYMDVSPKQVVSAATSCIPFLENDDSNRALMGANMQRQAVPLLVPEAPIVG
TGMEHVSAKDSGAAIVSKHRGIVERVTAKEIWVRRLEEVDGKEIKGDLDKYRLQKFIRSN
QGTSYNQRPIVKEGDVVEKREILADGPSMEKGEMALGRNVLVGFMTWEGYNYEDAIILSE
RLVKDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDERGIIRVGAEVKDG
DILVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRAPHGGDGIVLDVKIFNREDGD
ELPPGVNQLVRVYIVQKRKIHEGDKMAGRHGNKGVISRILPEEDMPYLPDGTPIDIMLNP
LGVPSRMNIGQVLELHLGMAARRLGLHVASPVFDGASEEDVWATLEEAGMARDGKTILYD
GRTGEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEILTVKSDDVVGRVKTYEAIVKGENVPEPGVPESFKVLIKELQSLG
MDVKMLSSTEEEIEMKELDDEDEQASDKLNLNIDSTESNV

NT seq 3543 nt +upstreamnt +downstreamnt
ttgacaggtcaactcattcagtatggacgccaccgccaacgtagaagctatgcacgaatc
aatgaagttttggagctaccaaacttaatcgagattcaaacagcttcttatcaatggttt
cttgatgaggggttacgtgaaatgtttcaggacatttcacccattcaagacttcaccgga
aatttagttttagagtttattgattatagtctcggagaaccaaaatatccggtggatgag
tcaaaagaacgtgatgtgacctatgcggcgcctttacgtgtgaaagttcgcttaattaac
aaagaaactggtgaagtaaaagagcaagaagtgtttatgggggacttcccgctcatgaca
gacacgggaacgttcatcattaacggagcggagcgagtgatcgtttctcagcttgttcgt
tcacctagtgtttactatagcgagaagattgataaaaacggaaaaaaaggttacaccgca
acggtgattccaaatcgtggtgcatggttagagttagagaccgatgcaaaggatattgtc
tatgtgagaatcgatcgtacacggaagattcctgtaacggttcttttgcgtgcccttggg
tttggttctgatcaagaaatcattgatttactaggagaagacgagtatctacgcaatacg
ctagaaaaagataacacagacagtgccgaaaaagcattgctggaaatctacgagcgtctt
cgcccaggtgaaccacctactgtcgaaaatgcgaaaagcttactcgactctcgtttcttt
gacccaaaacgctatgacttagcgaatgtaggtcgctataaagtcaataaaaaattacac
ataaaaaaccgcctattcaatcagcgcttagcagaaacgcttattgatccagaaaccgga
gaagtgattgcggaagaagggtccatcatcgatcgtcgtacgttggatcgcattctccca
tatttagaaaacaatgttggtttccggactgttcgcatgtctggtggtgttgtggaagaa
gatgaagttcgtcttcaatcggtgaaaatctatgcaccagatgatcaagatggagaacat
gtcattcgtgttatcggcaacggacttgttgaaaaggaaatcaagcatattacaccggcg
gacatcatcgcttcgattaactacttctttaacttgttgcatagtgtcggtggaactgat
gacattgatcatttaggaaaccgtcgcctccgttctgtcggtgagttgttgcaaaaccaa
ttccgtatcggattatcgcgtatggagcgggttgttcgtgagcgtatgtctattcaagac
ccgaacagcattacgccgcaagcacttattaacattcgcccagtgattgcctcgattaaa
gagttctttggtagctcgcagctatctcaattcatggatcagacgaacccgttagcggag
ttaacgcataagcgtcgtctttctgcgttaggacctggtggattaacgcgtgagcgcgca
gggtttgaggttcgtgacgtccactactcccactatggacggatgtgtccaatcgagaca
ccagagggtccaaacatcggtttgatcaactcgttatccacttatgctaaagtcaacgag
ttcggctttatggagacaccttatcgccgcgtagaccctgaaactgggaaggttacggcg
caaattgattacttaacggccgatgaagaagataactacgttgtggcccaggcgaacatg
aagcttgccgaggacggatcgtttatcgatgaaaatattattgcccgcttccgtggtgag
aatatcgttgtatctagagatcgtgtggactacatggacgtatcgccgaagcaagtcgtt
tcagctgcgacatcatgtatcccgttcttagaaaacgatgactctaaccgggcgcttatg
ggtgcgaacatgcaacgtcaggcggtaccgcttcttgtaccggaagctccaattgtcgga
acagggatggagcacgtatcggcgaaagattcgggtgctgcgatcgtctctaaacaccgc
ggaattgtcgagcgagtaacggcgaaagaaatttgggttcgtcgtctagaagaagtggac
ggaaaagagatcaaaggggatcttgataaatatcgcctacagaagtttattcgctcgaac
caaggaacgagctacaaccaacgtccaatcgtaaaagaaggagacgtggtggagaagcgt
gaaatccttgctgatggaccttcgatggaaaaaggtgagatggcgctcggacgtaacgtt
ctcgtcggctttatgacttgggaagggtacaactatgaggatgcgatcattttaagtgag
cgtctcgtaaaagacgatgtgtacacatcgattcacattgaggagtacgagtcggaagct
cgtgacacgaagcttgggccagaagaaattacgcgggatattccaaacgtcggggaagat
gcattgcgcaacttggatgaacgaggaatcattcgcgtaggggcagaagtaaaagatggc
gatattctcgtcggtaaagtaacgcctaaaggtgtgacggagctgacagcggaagagcgt
ttacttcatgccatcttcggtgagaaagctcgtgaagtacgtgatacgtccttacgtgcg
ccgcatggcggagacggaatcgtccttgacgtgaaaatcttcaaccgtgaagacggtgat
gaactgcctcctggtgtaaaccagctcgtccgtgtgtacattgttcagaagcgtaaaatt
catgaaggggataaaatggccggtcgtcacggtaacaaaggggttatctctcggattctt
ccagaagaggatatgccgtatttaccagatggtacgccgattgacattatgttaaaccca
ctaggggtaccttcacgaatgaatatcggacaagtgcttgaacttcatttaggaatggcg
gctagacgtcttggccttcatgtggcatcaccagtatttgacggtgctagtgaagaggac
gtctgggcgacgcttgaagaagcaggaatggcgcgagacggaaaaacgatcttgtatgat
ggacgtacaggtgaaccgtttgataatcgtgtctccgtcggcattatgtacatgatcaag
cttgctcacatggttgacgataagttgcacgcacgttcgacaggtccttactcccttgta
acgcaacagccattgggaggtaaagcgcagttcggtggtcagcgttttggtgagatggag
gtatgggcattagaagcttatggtgctgcctacacccttcaagaaatccttaccgtcaaa
tcggatgacgtcgtaggtcgtgtgaaaacgtacgaagccatcgtaaagggagaaaacgtc
cctgagcctggtgttccagaatcatttaaagttcttataaaagagctacagtctctcggt
atggacgtcaagatgctatcaagtactgaggaagagattgaaatgaaagagcttgatgat
gaggatgaacaagcaagcgacaaattgaacttgaatattgattcaacagaatcaaatgtt
taa

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (6)   
   PROSITE (1)   
All databases (21)

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